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Information for unigene UN45884
| FASTA Sequence |
| Unigene ID: UN45884 | Length: 561 |
SSR | | TCTTAAACAATAGTCTGAACCAAGAGGTAACTTGAACAAAACTAAAATAAGGTGTCGATAAAGAAGAACACAAGGTCGATGATAAA
TAGTATTGAGCAACAACGAACACAAAACAAAAACCGGAAACAGATGTAATAACTCTTCTAGTCTTCTTCCTCTCCCTCGTTCTCAG
CGATGTTGAAGTACCTCAACTCGTAGAGGTTACGGTCCTTGTTGGCTGCTGTTGATTAAACATCTGTGGGTGCTGCTGCATAGGAT
GCTGCTGGTAAGGGAACTGCTGCTGCTGCTGCATAGAAGGGTGAGGAGGAGGAGGCATGAATCCAGAAGCGTTCATTGGTGGTGGT
GGTGGATACTGTTGATGATGTTGAGGATGGAATCCAAATTGCTGTTGCTGTTGTTGTTGTTGAAAGTTAGGGAGTGGTTGCTGCTG
TTGCTGAGCATAAGGCAACCCAGAAGATGCAGCATAATCGTGTTGCTGCCTTCGATCCATCTGTAAACGCTGAAACACACCTAGTT
ATATCGCTTGGGGAAGATGGAGCAGCAGAAGCTAAACTTAGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_194848 SWAP/Surp domain-containing protein [Arabidopsis thaliana] | 292 | 1e-024 |
| XP_002867310 hypothetical protein ARALYDRAFT_491620 [Arabidopsis lyrata subsp. lyrata] | 276 | 7e-023 |
| XP_002528004 RNA binding protein, putative [Ricinus communis] | 188 | 1e-012 |
| NP_001130512 hypothetical protein LOC100191611 [Zea mays] | 177 | 2e-011 |
| ACN28196 unknown [Zea mays] | 168 | 2e-010 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54HN4 Putative mediator of RNA polymerase II transcription subunit 21 | 158 | 2e-010 |
| Q556J6 Putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 | 143 | 1e-008 |
| Q6BMM5 Glucose-repressible alcohol dehydrogenase transcriptional effector | 137 | 5e-008 |
| Q55F68 Adenylate cyclase, terminal-differentiation specific | 137 | 5e-008 |
| Q54IJ9 Probable basic-leucine zipper transcription factor Q | 135 | 9e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O49570 At4g31200 | 292 | 7e-025 |
| B9SPT4 RNA binding protein, putative | 188 | 8e-013 |
| B4F9G5 Putative uncharacterized protein | 177 | 2e-011 |
| C0P5D0 Putative uncharacterized protein | 168 | 2e-010 |
| Q55FL7 Putative uncharacterized protein | 161 | 1e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G31200.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 292 | 5e-027 |
| AT4G31200.3 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 292 | 5e-027 |
| AT4G31200.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 292 | 5e-027 |
| AT3G05560.1 60S ribosomal protein L22-2 (RPL22B) | 132 | 2e-008 |
| AT3G05560.2 60S ribosomal protein L22-2 (RPL22B) | 132 | 2e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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