Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN45908

FASTA Sequence
Unigene ID: UN45908Length: 753 SSR 
TTTTTTATCAAAGGAAACTTATCATTTAGCGAACATGCGAATTAACATTTCGTTTTAGGCAAACAAGACATAAACGATCTGTTACA
GCAAAAAAGTGAACAAGAACCAAACCAGACAACCAAACCAAACCAGACGGAACCAAATCTAAAGCGAAAACAGACAAGCAGACAAC
AACCCGACCCCTTAATGGTTGATTACCAGCCACCGCCACCTCCGCCGCTTCCTCCATAACCACCATCACCACCTCCGTAACCACCT
CCATCACGTCTGCCACCACCACCACCGTAGCCGCCGCCACTACCACCGTATCCGCGGCCACCACCACCACCAGATCCGTAACCTCC
GCTACGTCTGTCACCATATCCACCGCCTCCTCCACCGTATCCACCTCCACCGCGACCTCCGTATCCGCCACCACCACGGCCTCCAC
CACCGCCGCTTCCTCTGGACTGAGCCTCGTTGACGGTGATGGTACGGCCGTCGAGCTCCTTTCCGTTCATCTCCTCGATAGCATCC
CTCATGGATTTCTCATCCTTGGAGGTAACGAATCCGAATCCCCTTGATCTTGGTCTCACGATCGTTAATGATCTTAGAATCGATAA
CTTCGCCGAACTGTGAGAAGGTCCTTTCTAGCTCCTGATCTCCGGTGGCCCATGCTAGGCCTCCGACGAAACACCGGTACTCAACT
TCTGCAGACATTTTTTTCTTTTTTTTTGGAGAAATCAAAGGATGATGTGAGAAAGAGACTCGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
Q05966 RecName: Full=Glycine-rich RNA-binding protein 106094e-061
XP_002868897 hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp. lyrata]5413e-053
BAJ34207 unnamed protein product [Thellungiella halophila]5181e-050
ACJ04160 putative glycine-rich RNA-binding protein [Chorispora bungeana]5118e-050
P49311 RecName: Full=Glycine-rich RNA-binding protein GRP2A4992e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q05966 Glycine-rich RNA-binding protein 106092e-062
P49311 Glycine-rich RNA-binding protein GRP2A4999e-050
Q03251 Glycine-rich RNA-binding protein 84631e-045
Q99070 Glycine-rich RNA-binding protein 24603e-045
Q03250 Glycine-rich RNA-binding protein 74594e-045

TrEMBL top hits (Blast detail)Scoree value
B6VA25 Putative glycine-rich RNA-binding protein5116e-050
B9DFJ8 AT4G39260 protein4632e-044
Q41518 Single-stranded nucleic acid binding protein4363e-041
Q08I87 Putative glycine-rich RNA-binding protein4345e-041
A6G232 RNA-binding protein4247e-040

Arabidopsis top hits (Blast detail)Scoree value
AT4G39260.1 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding4828e-049
AT2G21660.1 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding4603e-046
AT2G21660.2 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding3941e-038
AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding3303e-031
AT4G39260.2 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding3197e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information