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Information for unigene UN45910
| FASTA Sequence |
| Unigene ID: UN45910 | Length: 427 |
SSR | | GCTGTTTGGTGTTTTCTTGAAGTAACTTCAAAAAGCAACCAAAGATTTTAGAAAACAAAGAATATGCTATTCAGTGGAGGAAAAAA
AAAGAGGATTCAGAAACTCCATTGTATAACCTCGCGTACTCTCTCAGCAATCGCCTTGCAACCTTCAGAAGCCAATGCAAACACCG
TTTCAAATGTTTCCATCGGTAACTTTGCATCCATCTACACATTTTTCAACCAATACATAAAAATTAACAATTTGATTGGGGATGGT
GAGAGAGAGAGACCTGAAGGAGTGTCACTTTGTCTAGTTTAGGTAGAATGCCGACGGTTACATCAGCTCCACCAGCGCTATCTTCG
ACATAGTTAAAGATCAAGAAGAGGAGTAGTGTTCAAGTATCCAGCACTGCAGGAAACAGCAAGATCACGCATTGGTATTCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191721 exosome complex component RRP41 [Arabidopsis thaliana] | 159 | 1e-009 |
| XP_002878393 hypothetical protein ARALYDRAFT_486650 [Arabidopsis lyrata subsp. lyrata] | 159 | 1e-009 |
| XP_002280302 PREDICTED: hypothetical protein [Vitis vinifera] | 131 | 2e-006 |
| XP_002320845 predicted protein [Populus trichocarpa] | 131 | 2e-006 |
| XP_002530509 Exosome complex exonuclease RRP41, putative [Ricinus communis] | 131 | 2e-006 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SP08 Exonuclease RRP41 | 159 | 8e-010 |
| A5BIU1 Putative uncharacterized protein | 131 | 1e-006 |
| A9PK13 Putative uncharacterized protein | 131 | 1e-006 |
| B9I8T9 Predicted protein | 131 | 1e-006 |
| B9SWZ0 Exosome complex exonuclease RRP41, putative | 131 | 1e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G61620.1 RRP41; 3'-5'-exoribonuclease/ RNA binding | 159 | 8e-012 |
| AT3G61620.2 RRP41; 3'-5'-exoribonuclease/ RNA binding | 159 | 8e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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