 |
Information for unigene UN45916
| FASTA Sequence |
| Unigene ID: UN45916 | Length: 843 |
SSR | | CCAAAAACCTTTAAAAATTGGATTTGGAGCTATACTCTTCAAAGATTTAAAGACACAAATCAACCAAGGAAATAATGTTCTGTTGC
AATAGAAATGATAACAGTATCATCCATCACATCTTCCCTCTATTTATGGCTGCTGCTGCTGCTGCTGCTTGTACTCTTCTTCTTCA
GTAAATTTCCAAACTTCCGGAGCAAAGGTTTCTTCTTCTTCTGCTCTAGTTCCTTTGAGTGCAGACTCCCAGAATATTCTATGTGC
TCTGCTGAAGACAAGCCATTGCTCAACTGATCAAAATTTTCACTGCCTTCTGCTTTTGATTCTTCTTCCTCTTCAGCAAACTCGTG
ATCTGACTCCCTCTCTGAATAAGCTTCTCTCTTGTCTATATGGCAGCCTTCCCCTTCCACGGAGTCTTTCTCCTTGTCTCCTTCAT
CTTTGTGAGGTAACAAATGGATTGGTGTGTCACCATTCAAATGGTTATCAATGGCTTCCACTGGACTTTCTTGTACCTTTTGTTCT
CCGCTTCTAGGCTTGCCGTTTTCATGTGGTTTCTCTAGTGTGGAAGAAGCTTTTTCCAGCGACTTTGATAACTCTTCTATCTTCTC
AAGCGCGGAAGCCTCCCTGGCCTTCAGCTCGACGTTATCATGAATCACAGCCTGCAACTCGGCTTCTTTGTCAAGCAGGATTGACA
ATTCCTCTATCTTCTTTGCAGCTGAAGCTTCCTGCTCCCTAAGCTCTTCATTTTCTTGATGAAGTCTTTGAAATTCGCTTTCCTTC
TGAAGCCAACTCTGCTCAAGATGCAACAACTCGTCAATCTTCTTTAAAGATGCGTTCTCTTTGGCCTTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAD38273 Hypothetical protein [Arabidopsis thaliana] | 552 | 2e-054 |
| NP_176681 uncharacterized protein [Arabidopsis thaliana] | 552 | 2e-054 |
| NP_680744 uncharacterized protein [Arabidopsis thaliana] | 503 | 9e-049 |
| XP_002520069 ATP binding protein, putative [Ricinus communis] | 365 | 9e-033 |
| XP_002270776 PREDICTED: hypothetical protein [Vitis vinifera] | 348 | 8e-031 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E9V7 Putative uncharacterized protein At4g27595.1 | 675 | 7e-069 |
| Q9XIP6 F13O11.30 protein | 552 | 1e-054 |
| B9S250 ATP binding protein, putative | 365 | 6e-033 |
| B9IPH4 Predicted protein | 229 | 4e-017 |
| Q9LFE4 Putative uncharacterized protein F5E19_70 | 160 | 4e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G27595.1 unknown protein | 675 | 4e-071 |
| AT1G65010.1 unknown protein | 552 | 7e-057 |
| AT5G16730.1 LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02930.1); Has 241703 Blast hits to 112530 proteins in 2711 species: Archae - 2642; Bacteria - 41887; Metazoa - 104467; Fungi - 18239; Plants - 8786; Viruses - 1373; Other Eukaryotes - 64309 (source: NCBI BLink). | 160 | 2e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
