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Information for unigene UN45928
| FASTA Sequence |
| Unigene ID: UN45928 | Length: 916 |
SSR | | AGAAAGAAAAGTATCCTTAAATTCAAAATCCTCGAACGCAAATGAAATGTGAAAAAAACCAAGTGTTTAGGTCTGAAAGATAAAAA
AACTGAGGCAATAATAAGCTTAAAAAGTAAACAGCTAAACATCATTACGAGGCAACGAAAGCTGTGGTGATTTACTCTTCGTCGTC
CTCATCATCATCATCACCACCTGCTGCTCCGTTCAATGCCTTGACTCTCTCGATCAAATTGTTCTTCCTCTCCTCATAGGTCAACT
TCTTCAAATTGTACCTCTTGTGCGCCTTGGGGGCAGGTTTCACGGTCTTCTTGGGGTTGGGGTCAGCACGGATAGCTGCATGAACC
TTCTTGTCACTGTGGGGGATATCAAGTCCTCCATCCAATGCACCCTTGAGGGCACCGAAGACACGGTTCCCTGTGGTGGTCCTGAT
GAGTCCAACATCAAGAAGAGCACGGAAAGGCCTCCTTGACTCAGTTGGTTCAACGGAAAAGTCTTCTCCAGTGGCCTCAACGTTGC
CCTCATACTCGGCATCCATTTCCAACATCTTGAGAACACGGCGAGCCAAAAGAAGGCCGGTACAGTAAGCTGCAGCGTAGTTGGTA
AGACCAACAGTGAGTCCATACTGAGGCAACTCGTGTGCGTAAGCAGAGGCCTTGACAATGTCACCGGCTATGCTTGCGGACACGAT
TTGGGCCACGATGCCTTTGTTGGTGAACCGGACGACGAAACGGTACTTTGGTGTGTTGTACTTGTTTTTGTCTTGGTTAATGAGAC
GGATTCTTGCTCTGTAATCGGTCTTACCAGCTCTTCTTCTCCTGAACTTGACTTGGTACCTCTTGAAGTAAGCATTCGACTTGGAT
GGCTTCACAAACACCATTGTTCAAGCGAAGCGAAGATTTGGTGTGAGAGATGAGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198790 60S ribosomal protein L5-2 [Arabidopsis thaliana] | 875 | 7e-092 |
| XP_002870764 hypothetical protein ARALYDRAFT_916328 [Arabidopsis lyrata subsp. lyrata] | 875 | 7e-092 |
| NP_566767 60S ribosomal protein L5-1 [Arabidopsis thaliana] | 872 | 2e-091 |
| AAM64753 ribosomal protein, putative [Arabidopsis thaliana] | 872 | 2e-091 |
| XP_002885727 hypothetical protein ARALYDRAFT_480054 [Arabidopsis lyrata subsp. lyrata] | 856 | 1e-089 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49227 60S ribosomal protein L5-2 | 875 | 3e-093 |
| Q8LBI1 60S ribosomal protein L5-1 | 872 | 7e-093 |
| Q6UNT2 60S ribosomal protein L5 | 812 | 7e-086 |
| A2WXX3 60S ribosomal protein L5-1 | 773 | 2e-081 |
| Q0JGY1 60S ribosomal protein L5-1 | 769 | 6e-081 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PFA8 Predicted protein | 827 | 2e-086 |
| B9SFU0 Ribosomal protein L5, putative | 822 | 7e-086 |
| C6TL04 Putative uncharacterized protein | 820 | 1e-085 |
| B7FJX5 Putative uncharacterized protein | 818 | 2e-085 |
| C5WZW1 Putative uncharacterized protein Sb01g048270 | 807 | 4e-084 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G39740.1 60S ribosomal protein L5 (RPL5B) | 875 | 3e-094 |
| AT3G25520.1 ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural constituent of ribosome | 872 | 7e-094 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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