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Information for unigene UN45929
| FASTA Sequence |
| Unigene ID: UN45929 | Length: 966 |
SSR | | GAATATAAATTATAACTCTCTGTTTTATATAAAAAAAATATAATTCTCAAATGTGAATACAAATGTGATGTAAAAATTATGAAAAC
TTTTGAATACAAATGTGACGTAAAATAACTTCAATAGACTTCAGGTTTTGACAGCTCTGTTTTATGTAAAAAAAAATTAAAAATCT
GATTCATTGATTCACTTCTTTTCAGCTTCCAGCTTCTGTACTTGTCTTCAGCCTGAATATCTCTAACGGTTGTTTTAACTCCCTCC
ATCACCTCAGTTGTTATTCCACTATGCCTTCTCTCCACTCTCCACAGTCAAGTCTGTAGACTCTCCACTCTACAGACTTCTGAAAC
AACAAAAGATAAGACTTATGCTTATGTAATCACGAGATAGAGCTAAACCTCCTTATAAGCAGATGACGCCTTTGAGAGAGATCGCC
GGAGAGACAGAGAGAACGCCTGAGAGAGAGAGAGAGAGAGCCTGAGAGATCGCCGGAGAGAGAGAGGGAGCCTGAGAGATCGCCGG
AGAGAGAGAGAGAGAGACTGAGAGATCGCCGGAGAGAGAGAGAGAGCCTTCGATAGTTCGATAAGAGAACCTCGTTGTCGTCGTCG
CTTCACAGAAGACGATTAGAGATGAAACGACGATTTGGGATGAACAGAGAAGACGACGACGATTTGGGAATAACCATCGAGAATCC
AGAGAGATAGTAATCCTTCCTTCGATCCTCAGATCTTTCTGCTCAAATAGCCAAATCTGGGTTGACGGTAGGAGGCCTAAAAATCA
AGTTCTGGATCCGCCGAGAAACCACCGGAAAAACAGAGAGAAACTCAGTCAGTCAAGGAGCAGAGAGAAACTCAGTCAAAAATCAA
AGAGAGAAGATTGAATTTGGTGGTCGCCATCGCTGCCTGAGACGATTGAATTCTCTTTCTCTCAACGCAATGCTTAGGGGAAAGAA
AGACGCCACGTGGCTCGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAC16467 unknown protein [Arabidopsis thaliana] | 178 | 5e-011 |
| XP_002268851 PREDICTED: hypothetical protein [Vitis vinifera] | 175 | 1e-010 |
| XP_001749714 hypothetical protein [Monosiga brevicollis MX1] | 171 | 3e-010 |
| XP_002630994 Hypothetical protein CBG02739 [Caenorhabditis briggsae] | 169 | 6e-010 |
| CAF92780 unnamed protein product [Tetraodon nigroviridis] | 169 | 6e-010 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49756 RNA-binding protein 25 | 168 | 3e-011 |
| Q86AH4 Putative uncharacterized protein DDB_G0271982 | 165 | 8e-011 |
| B2RY56 RNA-binding protein 25 | 161 | 2e-010 |
| Q1LWL6 Genetic suppressor element 1 | 150 | 4e-009 |
| Q5T200 Zinc finger CCCH domain-containing protein 13 | 148 | 7e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O64570 Putative uncharacterized protein At2g19370 | 178 | 4e-011 |
| A8WTM0 Putative uncharacterized protein | 169 | 4e-010 |
| A9UX47 Predicted protein | 169 | 4e-010 |
| Q4T2V2 Chromosome 10 SCAF10171, whole genome shotgun sequence. (Fragment) | 169 | 4e-010 |
| D2HE26 Putative uncharacterized protein (Fragment) | 168 | 5e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G03150.1 emb1579 (embryo defective 1579); binding / calcium ion binding | 138 | 9e-009 |
| AT2G33730.1 DEAD box RNA helicase, putative | 120 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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