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Information for unigene UN45933
| FASTA Sequence |
| Unigene ID: UN45933 | Length: 927 |
SSR | | CCAGTAATAACTTATAAATTAATAATAAGGAAGTTGATATTTTATTAATTTACAGAATCACTAGTCAAAAGGAACTATATTTAAAA
CGAGGCTAGTACACAAACTTTTCAATCGTTTCATCCCAAATATATAATTATGTTGCATGAAAATTACGAACTATTTAAGGCAAGTT
TACAACTTTAAATGTTCCCAGTGACTAGATACAAAAAGCTTGACTAGATCATGGTTTGCTTTCTCAAATTCCAGAGCACCATTTCA
ACAATATATATATATATATATATCCCCTCATTTGTTCTTGGGCGCTCTGTACAAACAAAGGCTCAGCCACAGCACGAGCCACATGC
CGGTAGGGAATTGTGGTCAGCTCCACGGATATCATTCAAGCCACGCACATTGTCGAGGCCCCCACGAGGAGGTCCACCACCACCTC
CTTCGACGTATGCCATATTGCCGTAATCTTCTGGATTATTTTTCTTCCTCGACCGAATAAGGGCAATTATTTTGAGAACATCATCT
ACACTTTTTTTTTTTTTTTTTTTTTTTTACAGTAATAACTTATAAATTAATAATAAGGAAGTTGATATTTTATTAATTTACAGAAT
CACTAGTCAAAAGGAACTATATTTAAAACGAGGCTAGTACACAAACTTTTCAATCGTTTCATATTCAGGAGTATAATAATTCAATT
TATACTCTTTAACACCAGCTTTGAATCCAACACTTGCTTTAGTCTCTGTTTGTGGTGACATAAGTCCCTCCCTACAAGTCATGAAT
TTAGAATTCTTGCAATAAAACAAAACAACAAGGTCTACTCGACTTAAATTAGGAATAGATTTAATTAACCTTTTTCACAGGAATCT
TTCACAAAATTATCAACTAATCAGAATGATTCTTTCTTAGACCATGATATTTGATTCGCCAAATACC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_192563 glycine-rich protein [Arabidopsis thaliana] | 201 | 1e-013 |
| NP_001190688 glycine-rich protein [Arabidopsis thaliana] | 201 | 1e-013 |
| AAZ94659 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Cucumis sativus] | 190 | 2e-012 |
| ADQ47554 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Rhoicissus tomentosa] | 190 | 2e-012 |
| ADQ47555 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Rhoicissus tomentosa] | 190 | 2e-012 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48686 Ribulose bisphosphate carboxylase large chain | 164 | 9e-011 |
| A6MMD0 Ribulose bisphosphate carboxylase large chain | 161 | 2e-010 |
| O62964 Ribulose bisphosphate carboxylase large chain | 161 | 2e-010 |
| P19160 Ribulose bisphosphate carboxylase large chain (Fragment) | 159 | 3e-010 |
| P48700 Ribulose bisphosphate carboxylase large chain (Fragment) | 159 | 3e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VY68 Putative uncharacterized protein At4g08230 | 201 | 7e-014 |
| B7SQC8 Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) | 189 | 2e-012 |
| B7SQC9 Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) | 189 | 2e-012 |
| C4MFY2 Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) | 189 | 2e-012 |
| C4MFY4 Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) | 189 | 2e-012 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G08230.1 glycine-rich protein | 202 | 3e-016 |
| ATCG00490.1 large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. | 158 | 4e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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