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Information for unigene UN45935
| FASTA Sequence |
| Unigene ID: UN45935 | Length: 830 |
SSR | | GGATATACTAATATAACTTCACTGGAACTGATGAGCATATCTATCTGCCAATGATCATCAATCTTAGAATTAGTAAAAGAATACAC
TCACAATTGCCTCAATATCTTCTATAGTTTCTATATATGTTTATGACCCTAACGAACTAATCCAAACACTCTCTACATAACCTAAA
AAGGTTTCATCTTTGTCCATATCGATATTAAACTTCACACAACAAAACAATTAGCCTCTAGTTTCTGTAAAACATAGCACTAAGCA
TCAAAAAGGCATCAGAGAGAGTAAGTACCTCTCGTCTACATCAACAGACAAAGCGCCAATCAATTAAAAGGAACAGCTTTTTACGG
TAGGGAAAGTGTCGTTAGAAGATTGAGAACGGTTGACATGGTCATTAGGATGGACACATTTTACACCACGTTTGCGACCAAGAATC
TCAGCTGCTCTGTTAGCAATGACCTCAGCTACTTCAAAGTTTCCTCACAACTAGCGAACACACACTAAACACAGCTCGTAGAGATA
ACAACGGAGAGTTGCTGCAGTTTCTGAAGGGAAGAGCGGATATGGAAGCAAGGCGGAGGTGACGGCAAAGTTGGTCGCAGGCGTGT
ATGGATGCGGCAGTTGGGAAGCAGAAACATAGACCGTGTGTCACTGTTCAATAACAGAGCACAGAAAGAATCAAACTTTCAGGTAA
AAAAAGCCCTTCAGTGTGAGCAGCAGAGCCACCGATTGACAAAGAATTGAGGAAGAAGAATTAGGGTTTTTAAAGAGAGAGAGAGA
TGGAAGTGAGGAAGAAGAATTGAATAGGGAAGAAGAAGACGAAGATGGATGAGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_182273 fumarate hydratase, class II [Arabidopsis thaliana] | 203 | 5e-014 |
| AAB39989 fumarase [Arabidopsis thaliana] | 203 | 5e-014 |
| BAH19491 AT2G47510 [Arabidopsis thaliana] | 203 | 5e-014 |
| XP_002880309 hypothetical protein ARALYDRAFT_483931 [Arabidopsis lyrata subsp. lyrata] | 203 | 5e-014 |
| ABK24782 unknown [Picea sitchensis] | 200 | 1e-013 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93033 Fumarate hydratase 1, mitochondrial | 203 | 2e-015 |
| Q9FI53 Fumarate hydratase 2, chloroplastic | 187 | 2e-013 |
| Q60022 Fumarate hydratase class II | 168 | 3e-011 |
| O66271 Fumarate hydratase class II | 168 | 3e-011 |
| P08417 Fumarate hydratase, mitochondrial | 153 | 1e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFH4 AT2G47510 protein | 203 | 4e-014 |
| A9NVX1 Putative uncharacterized protein | 200 | 8e-014 |
| B8A0E6 Putative uncharacterized protein | 190 | 1e-012 |
| B8AP09 Putative uncharacterized protein | 190 | 1e-012 |
| B9F8C3 Putative uncharacterized protein | 190 | 1e-012 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47510.1 FUM1 (FUMARASE 1); catalytic/ fumarate hydratase | 203 | 2e-016 |
| AT2G47510.2 FUM1 (FUMARASE 1); catalytic/ fumarate hydratase | 203 | 2e-016 |
| AT5G50950.1 fumarate hydratase, putative / fumarase, putative | 187 | 2e-014 |
| AT5G50950.2 fumarate hydratase, putative / fumarase, putative | 187 | 2e-014 |
| AT5G50950.3 fumarate hydratase, putative / fumarase, putative | 187 | 2e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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