Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN45962

FASTA Sequence
Unigene ID: UN45962Length: 864 SSR 
GTGTCGTTTGATTTCTCCACAAAACCACGAGTCCAAAATGTAATCAGACACTAAGATAAAACATAAAATCACCCAATTGAAAAAAA
AACAAAAACCTTTATCTTTCTTCTAAGCACTCTTCTTCCTCTTGGGTTTCAAACCACCACAAGACTCTTGTTTCGTAACCTTTGTC
TTCTTCTTCGTCGGCTTTAACTCATCCTTACCCTTAGCCAATTTCTTCTTCGGTTTCTCAGCTTCTGCAACCTCAGCCACCCCCTT
CTTCTTCGGCTTTAATTCATTCTCTTTCAACTTCCCCTTGGCCACTTTCTTCTTAGGTTTCTCAGCCTCTACAACCTCACTCACCT
CCTTCTTCCTCTTCTTCTCCTTAACACTAACCTCAACATCACCAATCTCATCTTCATCAAGCACCTCAGACACATTACTATCCATA
TACCTAACCTCATGAATCCTACCCTTCTTCTTCTTCTTCTCCTCCTTCACCAACCACTCTCCTTCTCCTCTTCCTCAACAACAACA
CTCTTCCCACCATCAATCTTCAGCTTCAAATCAGGCACACTGTGATAAACAGGCAACGCCACGCTCCCCGACAGCTTCAAATGCAA
AGACCTAACATACTTCCACTTCCCCGGCAACACCTCAACAACCCCCTTCAACGTCTCCACCACATTCTCCACAATCTCCCCTCCTT
CCATCGACAACTTCCCAACCTTCACAACGCTACACGTCCCCGTCCTCACGAAAAACATCGCCGATCCACAAACCTTCTCCACCTGC
TCCTTCCAGTTCCTATGGTTCAAATCCACAGCCGCCGGAATCTTCTTCGTCTCGAAAAACTTCTTCCCGATCAGCCTCGGCAGGAG
AGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876472 hypothetical protein ARALYDRAFT_486318 [Arabidopsis lyrata subsp. lyrata]5082e-049
NP_191425 ribosomal protein L1p/L10e family protein [Arabidopsis thaliana]4876e-047
XP_002879998 hypothetical protein ARALYDRAFT_903637 [Arabidopsis lyrata subsp. lyrata]4563e-043
NP_181793 Ribosomal protein .1/L10e family [Arabidopsis thaliana]4349e-041
AAM76766 hypothetical protein [Arabidopsis thaliana]4349e-041

Swiss-Prot top hits (Blast detail)Scoree value
A4FV97 Ribosomal L1 domain-containing protein 11801e-012
Q17RH7 Putative protein TPRXL1746e-012
Q75JC9 Uncharacterized protein DDB_G02716701541e-009
Q55FI4 Nucleolar protein 581397e-008
A5E4P1 Protein PXR11343e-007

TrEMBL top hits (Blast detail)Scoree value
Q9LXT5 Putative uncharacterized protein At3g586604874e-047
Q8L8B2 Putative uncharacterized protein At2g42650/F14N22.84346e-041
Q8RY41 At2g42650/F14N22.84346e-041
Q8S8D2 Putative uncharacterized protein4346e-041
A5BSP3 Putative uncharacterized protein4132e-038

Arabidopsis top hits (Blast detail)Scoree value
AT3G58660.1 60S ribosomal protein-related4873e-049
AT2G42650.1 60S ribosomal protein-related4344e-043
AT1G06380.1 ribosomal protein-related3322e-031
AT1G62760.1 invertase/pectin methylesterase inhibitor family protein1333e-008
AT3G18810.1 protein kinase family protein1217e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information