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Information for unigene UN46002

FASTA Sequence
Unigene ID: UN46002Length: 904 SSR 
GGACATCTTCTCCTTGGTGTAGAAAAAAGTGAGACAAAAAAACATCAATCTATTCAATCTAAGAGAGAAGAACAGGATTTGGAGAG
AGAACAAGAAACATGAATAACCAGCATGTAAATGATCATAATCTCCTACTCATTTCTCAGATGTACCCGAATGTCTATACTTCATT
AGTACCACAACAAGTAGATTCAAAACCAGTGCGTCCGAGGAGGAGGAGGAGGAGCAAGAATGTTGAGATGGCCGAGGAAGCTGGAG
ATGGAAGCAATGGGTGGTTTAGGAAGAGGAAATTGAGTGATGAGCAAGTAAGAATGCTGGAGATGAGTTTCGGAGTTGAGTATAAG
CTTGAGTCCGAGAGGAAAAACCGTCTTGCTTCGGAGTTTGGGCTTGATCCTCGTCAAGTGGCCGTCTGGTTCCAGAACCGCCGTGC
ACGGTGGAAGAACAAGAGGCTTGAAGATGAATACACCAAACTCAAGAACGAACACGAAAACGCCGTCGTTCAGAAGTGTCGTCTTG
ATTCTGAGGTTCTTCACCTAAAGGAACAGCTTTATGACGCTGAAAGAGAGATCCAACGGTTGGCACAAAGAGTCGAAGGAGCCGCA
AGCAACAGTCCAATCTCATCTTTTATCTCCGTTGAAGCTAATCAGGCTACGCCGTTTTTTGGAGATTATCAAATCGGAGACGACTG
TGACGGTTACGAGAACTTGTTCTACTCGCCGGAATACATTGATGGATTAGAATGGATGAGCCAACTTATGTGAAAACAACTACCCA
ACTTAATTAATATAAAGTTCGTAAAATGATAGGGGTTATTTGTGATAAATAACTAGGTTGTTTATATGATTGATCGATTTCTATAA
CGAAGCAGAATGTAGATAAAACTATGGGTTTGATTAGGTTGTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886182 ATHB21/HB-2 [Arabidopsis lyrata subsp. lyrata]8953e-094
NP_179445 homeobox-leucine zipper protein ATHB-21 [Arabidopsis thaliana]8668e-091
XP_002866994 homeobox-leucine zipper protein ATHB-40 [Arabidopsis lyrata subsp. lyrata]7475e-077
CAB16824 homeodomain protein [Arabidopsis thaliana]7332e-075
NP_195392 homeobox protein 40 [Arabidopsis thaliana]7271e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZU70 Homeobox-leucine zipper protein ATHB-218664e-092
O23208 Homeobox-leucine zipper protein ATHB-407339e-077
Q9LVR0 Homeobox-leucine zipper protein ATHB-534613e-045
A2YN17 Homeobox-leucine zipper protein HOX143467e-032
Q7XI85 Homeobox-leucine zipper protein HOX143467e-032

TrEMBL top hits (Blast detail)Scoree value
C0SV50 Putative uncharacterized protein At2g18550 (Fragment)8665e-091
B9HET5 Predicted protein5637e-056
B9MXR7 Predicted protein5521e-054
B9SGI5 Homeobox protein, putative5332e-052
B7F7W0 cDNA clone:J033105B17, full insert sequence3461e-030

Arabidopsis top hits (Blast detail)Scoree value
AT2G18550.1 HB-2 (HOMEOBOX-2); DNA binding / transcription factor8672e-093
AT4G36740.1 ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40); DNA binding / transcription factor7274e-077
AT5G66700.1 HB53; DNA binding / transcription factor4613e-046
AT3G01470.1 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor2382e-020
AT1G69780.1 ATHB13; DNA binding / sequence-specific DNA binding / transcription factor2338e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information