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Information for unigene UN46031

FASTA Sequence
Unigene ID: UN46031Length: 878 SSR 
TTTTTTGTGGTCAAAAGTCAAGTTACATCTCTCTCTCTCTCTCTTATCTCTTCTCGAGTTCTTGTCGATGTTCTTATACAGAAGCC
AAAAAACGTGAATCAAGTTACAAACCTAATGGTTCTCTGTCTTAACTTTCAACCTGGTGTAGGAACCGACAGAATCAAAGATCAGT
CATCTGCATGAGTAGATCGGAGTTCAATAATCGTCTTTAAGCACTCCAAAAGTCAGATCGGGGGATATTGAAAGACGGTTTGAACA
TCGACGAAGATATAACAATGGTCGGTGAATCCGGAATTGATGAACTCTAGTAGAGGAAGAGGAGCTTCAGTTAAGAAGCCATCTGC
TGGTGAACTTCGTCTTCAGAAAGATATATCAGAGTTGAATCTTCGAAGCTCTTGCACGATATCATTTCCCAATGGCAAAGATGATT
TGATGAACTGCAGAGATTCCATTAAACCCGATGATGGTTACTACCAGGTGTTGTTGCGGGGCTTTTGGTTGAAAACTCTCTGAAGT
TCTTACTGAATTTTGGTGAAGTTTCTACATACCAGGTGGTCAACTCAGTGAAGGAGTACATGCTTGTGAAACCTGCAAGGGACGCT
GCTGCTAAGATGGAAGCCGAAGCAGCTACAGCTATAGATGATGGTCGACTCCATGATGATAATGAGTCAAACATAAGGTAACAACT
CAGTGAATTAGTTCAAAATAGTTTTCGTATCCTTTAAAATTGCAAACCGGATCAAACAAATAATGGTTTGATCTTTGGCAGTCTCA
CAAAATGGTTCAAGTAGCTCTGCATAGGTTCCCCACAGACAGCATGGAAGAGAATTTCCTCTAATGAAAAAAATGCATGTTATAAA
CTAATCCAAGCCTCTATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACI16426 RUB1-conjugation enzyme [Brassica juncea]2474e-019
CAB16820 ubiquitin--protein ligase-like protein [Arabidopsis thaliana]2385e-018
NP_001154289 NEDD8-conjugating enzyme Ubc12 [Arabidopsis thaliana]2332e-017
BAF02096 ubiquitin-protein ligase like protein [Arabidopsis thaliana]2332e-017
BAJ33605 unnamed protein product [Thellungiella halophila]2322e-017

Swiss-Prot top hits (Blast detail)Scoree value
Q9SDY5 NEDD8-conjugating enzyme Ubc122338e-019
Q9ZU75 Probable NEDD8-conjugating enzyme Ubc12-like2122e-016
A3KN22 NEDD8-conjugating enzyme Ubc121371e-007
P61081 NEDD8-conjugating enzyme Ubc121371e-007
P61082 NEDD8-conjugating enzyme Ubc121371e-007

TrEMBL top hits (Blast detail)Scoree value
B6E0M7 Ubiquitin carrier protein2473e-019
B9SGH9 Ubiquitin carrier protein2098e-015
C6SV99 Ubiquitin carrier protein2081e-014
Q8GV26 Ubiquitin carrier protein2025e-014
A9PAZ9 Ubiquitin carrier protein2017e-014

Arabidopsis top hits (Blast detail)Scoree value
AT4G36800.1 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase2338e-020
AT4G36800.2 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase2338e-020
AT2G18600.1 RUB1-conjugating enzyme, putative2122e-017
AT1G05350.1 thiF family protein1361e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information