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Information for unigene UN46052
| FASTA Sequence |
| Unigene ID: UN46052 | Length: 556 |
SSR | | GGGTCTTCTTAAAAGCCCTAGAGTTCAGTTCCTCCGACTCAGCCCCGAGCGAAAGAGAGAGAGAGAAGAAATGATGAAGCGTCTGA
TCCCAACGTTCAACCGCATCCTGGTGCAGAGAGTCATCCAGCCTGCCAAAACCGAAAGCGGCATCCTCCTCCCTGAGAAGGCCTCC
AAGCTGAACTCGGGAAAGGTGATAGCAGTGGGACCTGGATCAAGGGATAAGGACGGGAAATTGATCCCAGTCTCTGTTAAGGAAGG
CGACACTGTTCTTCTCCCAGAGTATGGCGGTACTCGGGTCAAGCTAGGCGAGAAGGAGTACCATCTCTTCCGGGATGAGGACGTCT
TGGGGACGTTGCACGAAGATTGAGAAAGGCTAAGCGGTGGTCTTGTTGGCGTTTTAATGTTATGGGAAGAGAAACAAACAAGTTAT
TTATAATTTTTAGTTTATGTGGTTGGACATGTCATTGAAATTTCCTTTAATGGACTATATTTGTCCCTTCTGAGTCGGTCGTTCCA
GTTTTTCCAAATTGTCATCAATCCTAAGATAAGTTAAGTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q96539 RecName: Full=10 kDa chaperonin; AltName: Full=Chaperonin 10; Short=CPN10; AltName: Full=Protein groES | 486 | 3e-047 |
| NP_563961 chaperonin 10 [Arabidopsis thaliana] | 485 | 4e-047 |
| BAJ34090 unnamed protein product [Thellungiella halophila] | 484 | 5e-047 |
| XP_002875073 hypothetical protein ARALYDRAFT_322491 [Arabidopsis lyrata subsp. lyrata] | 451 | 4e-043 |
| XP_002299972 predicted protein [Populus trichocarpa] | 423 | 6e-040 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96539 10 kDa chaperonin | 486 | 2e-048 |
| P34893 10 kDa chaperonin | 485 | 2e-048 |
| O59804 10 kDa heat shock protein, mitochondrial | 249 | 5e-021 |
| P61603 10 kDa heat shock protein, mitochondrial | 248 | 7e-021 |
| P61604 10 kDa heat shock protein, mitochondrial | 248 | 7e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GG69 Predicted protein | 423 | 5e-040 |
| A9P8P7 Predicted protein | 408 | 3e-038 |
| C6SZ55 Putative uncharacterized protein | 406 | 4e-038 |
| C6TFY7 Putative uncharacterized protein | 402 | 1e-037 |
| A3FPF3 Small molecular heat shock protein 10 | 396 | 6e-037 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14980.1 CPN10 (CHAPERONIN 10); chaperone binding | 486 | 2e-049 |
| AT1G23100.1 10 kDa chaperonin, putative | 384 | 1e-037 |
| AT5G20720.1 CPN20 (CHAPERONIN 20); calmodulin binding | 142 | 1e-009 |
| AT5G20720.2 CPN20 (CHAPERONIN 20); calmodulin binding | 142 | 1e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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