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Information for unigene UN46068

FASTA Sequence
Unigene ID: UN46068Length: 939 SSR 
GGGAAAAAGACAAACTATACCGTCGACAAAAATTAAATAGCGAGCGATAACTCGTCCCGAGTCCTCTCGCTCCGACGGCGAATCCG
TCTTCTCCCGCCGATGTCAGCATACAATAACAGAGCAAATCCGTGATTCTGTAGATTCTCCAAATCCAGGAGGCAAAGAAGAAGAA
GAAGAAGAGGAAGATGAGTTTCGTATTCAGAGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGATTCATCCCCGAGAGACGAG
CTATGCGTGTTCATGGAGCTCGACCTGTGAACTCTAATTCCCTCGCTTTTCTTGTCACTGTTCTTTTGCTGTTTATGATTCTCAAC
TCGCATCAGATGCCTCCTAATTTCCTGCTCTGGCTTGTGCTTGGGGTGTTTTTGATGACTTAGATTATGAAACTCTAAGAGCACTT
GATTCTGATAATGTCCCCACAAATTCTATGAGCGAGGAAGAGATAAATGCACTTCCAGTACACAAGTACAAAGTGTTGGATCCTGA
AAATGGTTCCTCTTTGACAAAGCAGGCATCAACAACATCCTCAGCGGAGAAGAAGCAGGATTCTGTCGGTGCGAGTAAAAAAGGAA
CGGAAGATGAGCTCACTTGTAGTGTTTGCCTCGAACAAGTTACCGTTGGGGAGGTTGTTCGCACCCTACCTTGCCTGCATCAGTTT
CATGCAGTCTGTATCGATCCATGGCTTATACAGCAAGGAACATGTCCTGTCTGTAAATTCAAGGCGCACTCAGGATGGCAAGAACA
AGACGACGGGACAGATGATGATGATGATGATGATGAAGCTTCCGTCATGGTTTGAGAGTTCGGTTTTTGGACACTTGTTATGTTAT
TAATGTGTGTATTGAAAAATGGAGACCCCAAAACAAATCATGTAATGGTTGATGAGTTTTTAACTGTTTGATTAGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878037 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6339e-064
NP_191112 E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana]6222e-062
ADN34069 protein binding protein [Cucumis melo subsp. melo]5172e-050
XP_002315216 predicted protein [Populus trichocarpa]5021e-048
CBI31650 unnamed protein product [Vitis vinifera]4975e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q9M2S6 E3 ubiquitin-protein ligase SDIR16227e-064
Q6NRX0 E3 ubiquitin-protein ligase RNF1491721e-011
Q3U2C5 E3 ubiquitin-protein ligase RNF1491702e-011
Q8NC42 E3 ubiquitin-protein ligase RNF1491692e-011
Q9ULT6 Zinc/RING finger protein 31612e-010

TrEMBL top hits (Blast detail)Scoree value
B9HTG7 Predicted protein5029e-049
B9T008 Protein binding protein, putative4921e-047
C6TGC2 Putative uncharacterized protein4875e-047
C6TKE4 Putative uncharacterized protein4831e-046
A5BC54 Putative uncharacterized protein4732e-045

Arabidopsis top hits (Blast detail)Scoree value
AT3G55530.1 SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1); protein binding / ubiquitin-protein ligase/ zinc ion binding6227e-065
AT1G04790.1 zinc finger (C3HC4-type RING finger) family protein1602e-011
AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein1584e-011
AT3G58720.1 zinc finger (C3HC4-type RING finger) family protein1559e-011
AT5G24870.1 zinc finger (C3HC4-type RING finger) family protein1541e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information