Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN46078

FASTA Sequence
Unigene ID: UN46078Length: 941 SSR 
GGGAGAGAGAGAGAGAGAGAGAGAGAAAGGAGTGAGAGAGAGAGACAGAACTCTCTGGCTGGTCTTTTTTTTTTTTTTCCCGATCA
GATCGAAGAGTTCGAACTAAGAGATCCAAAGCTTCACCACAATTGTCGTTGTTTCATATTATCCGCAAGGTACGCTTTTTTCCGCA
AGATCTATCGAATCCTATCGTTTTGGTGATTTTCTTCGGTAAATCTCTTCGAACTGGAGAGTTATCTGAATCCCAAAGCTCAATTT
CACTTCCACAAGCATCAGAGAAGAGAAACATCTGTTGAATTCTTCACTGAACTCGCAGATCTGAGTTGCTAGCTTCAGAATATTAG
AGAATTCACGTCAATTTTGCGAGTAAACGTCGACAATTCCCCGCGCAGAGAGTTGTTTTTTTTTGAAAAAGAGATTTAAAGAACCA
TCGAAGCTGTTGTTGTTGTTGTTGTTGTTCATGCGGGCAACATCAGTATATCAAGTGTTTACTCGCAAGGATTGGTGAAAACACTA
AGAGAAGCATTGGAGAACTCAGGAGTGGACTTAACAAAAGCAAGCATCTCTGTCGAAATCGAACTTGCTAAACAATCCTCTTCCTT
CAAGGATCATGAACTCCGTGGACCGGTCTCTCGAACAGGAAACAATGACGACGCCAAGCAAAGTCGGAAACCAAAACGGCTCAAGA
CGAACAACACAAGTTAAAAAAAAGCATCACAGTCGGGTATAATAACCCCAAAGTTGAAACGTCCGTTTTCATTCTTCTTTATCTCA
AAACAGGGCTTTCTTTTTCAAAAATTTATAGATATATTCAATCTTAAATTTTTCTTACTTTGTACATTGGAAACTATAATTTTTAT
AATGTTTTATCTCGTGGGGCCATAATCTTTTGAGGAGGCCTAAGACTAGTGAGACCCGGTTATGCTAACCGCATTTTTATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34399 unnamed protein product [Thellungiella halophila]3443e-030
NP_196430 transcription factor BIM1 [Arabidopsis thaliana]3013e-025
NP_001119190 transcription factor BIM1 [Arabidopsis thaliana]3013e-025
NP_001154698 transcription factor BIM1 [Arabidopsis thaliana]3013e-025
NP_001190258 transcription factor BIM1 [Arabidopsis thaliana]3013e-025

Swiss-Prot top hits (Blast detail)Scoree value
Q9LEZ3 Transcription factor BIM13011e-026
Q9CAA4 Transcription factor BIM21371e-007

TrEMBL top hits (Blast detail)Scoree value
C0SVN9 Putative uncharacterized protein At5g08130 (Fragment)3012e-025
Q60D85 Putative bHLH family protein1542e-008
A9PAY4 Putative uncharacterized protein1506e-008
B9I2U7 Predicted protein1506e-008
A5AMI1 Putative uncharacterized protein1471e-007

Arabidopsis top hits (Blast detail)Scoree value
AT5G08130.1 BIM1; DNA binding / protein binding / transcription factor3011e-027
AT5G08130.2 BIM1; DNA binding / protein binding / transcription factor3011e-027
AT5G08130.3 BIM1; DNA binding / protein binding / transcription factor3011e-027
AT1G69010.1 BIM2 (BES1-interacting Myc-like protein 2); DNA binding / transcription factor1371e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information