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Information for unigene UN46088
FASTA Sequence |
Unigene ID: UN46088 | Length: 674 |
SSR | | GCATTCTCGAACTCTGAGCCAGAGGAGAAGACATAAGCGTAATCTATCCACTCATCAACCTGATAACGAATCCATAACATAAAAAA
AGGCAAAGACTTTATACATGATAGAAAATTCGTGGTGTAAGAAAAAGGTTGAGACTTTACCTGAGAAGATTCAAAGGCATCGCGGC
CGTAGAAGTCAGGAAGCGAGGGAGCTGATCGAGCAACGTAGCGTAGAAGAACGGGAGTCCCACTCAGTTTTCTCCTGAAATGAAAT
GAAAGAGAAGGTTTTTTTAGTTTCCCGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAACAGAAGGAAGGAAAGTA
CCCGTCGGAGAAGACGAAAGTAGGGACGGTGGTTGCGGCGGAGGAGGAGTCAATGGTCACCGGAGAGGATGAGATATGAAGAGCAG
CGATGACTGAAAGCGGTGGAGCGTCCGCTGGGAAAGAAAGTTTGATCCTTTCCATCTTCTTCTTCCTTTGGGCAATGTGTAGAGAG
TGAGAGCAGAGAAGGAGTGGGCGGCGATGTTTTGTTCTTCAAGGTTAGGTTTTTTCAGACTAGGAAGGTATCTTTTTTTTACTGGG
GGGAGGCTCGAGTTGTGAATGTTTTACATTATTGTCCATAAAGTATTAATCTTTACATTATTTACCCCAAAA
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GenBank top hits (Blast detail) | Score | e value |
NP_850874 glutamyl-tRNA synthetase [Arabidopsis thaliana] | 179 | 2e-011 |
AAC13597 similar to aminoacyl-tRNA synthetases [Arabidopsis thaliana] | 179 | 2e-011 |
XP_002872225 hypothetical protein ARALYDRAFT_489491 [Arabidopsis lyrata subsp. lyrata] | 175 | 6e-011 |
EGD72741 hypothetical protein PTSG_04470 [Salpingoeca sp. ATCC 50818] | 137 | 2e-006 |
XP_003344237 HOS4 protein [Sordaria macrospora k-hell] | 134 | 3e-006 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q86AH4 Putative uncharacterized protein DDB_G0271982 | 124 | 2e-006 |
B2RY56 RNA-binding protein 25 | 121 | 5e-006 |
TrEMBL top hits (Blast detail) | Score | e value |
O65253 F21E10.12 protein | 179 | 1e-011 |
O82462 Glutamyl-tRNA synthetase | 179 | 1e-011 |
D1ZTP8 Putative HOS4 protein | 134 | 2e-006 |
A6S7W3 Predicted protein | 133 | 3e-006 |
Q23LR2 Putative uncharacterized protein | 131 | 5e-006 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G26710.1 glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative | 179 | 9e-014 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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