Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN46117

FASTA Sequence
Unigene ID: UN46117Length: 1034 SSR 
GGAGACAACTATTGTCCGCTTCTTATCTCTGAAAAAGAAAAAAACATGACACAGAGAGTCTGAAGATCAAAGCAAAAGCCTTTCGT
AGTCGTAATCGAAACGCCAAATCATTACCGTTCAACTGAAAATCCAACAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CCTCTCTCATTACAATGGAGAACGGTGCTGGATTTACAGGAGACAATATGAAAAAGAAAAAGCCTGTTGGTGATGGTTTTGTCGGC
GGGTTTTTCCCTGTCTCTACCACCAAGATCGCGTGGAAATCAAGGAAAAGATCAGCATCTGCGAACTCAGACAAAGCGCTGGAGGC
TGCTGCTATGGAGGTCACACCAGAGAAGGATGAGTCAACAACAACAACAAAAATGGAAACTACAACTCCACCTGTTCTGTCCGAGA
AAAGAAGAGCTCTGTTTGAGCCACTTGAACCTATTACTACAAACTTGAACGGAAAGCGACCAATGGACGCTGATTCGCTCTTGCCG
CCCCCAGATTTCGAGTCTGCAAACTACCCGAAAGGTTGGTTGATCGGTAAGAAGAGGAAGCTGGTCAATGTTGATGTGGTTGAGAG
CATGCGAAGAATCGCTGTCCAAGAAATGAACAGAAAGGACCGAGAGATAGATGGGTTAAACGAGCAGCTAGAAGAGGACTCGCGTT
GCTTAGAGCATTTGCAGCTTCAGCTGCTACAAGAGAGAAGCAAGAGAACAGAGATTGAAAGAGAGAACGCAATGTTGAAAGAGCAA
GTCGATATGCTTGTCAACATGATACACCAAGATGAAGAAGAAGAAGTAGCAGAAGAACCATAGCTCTAGCATGGTGTCCTATTTAA
AGTACGTCTACAATATTAAATAGCTCTGTTCTGTTTGTTCATTCATTTGTCCATAAAACGTAAGGAAAGGAAGAAGCTTTACTACC
AATCTATTTATCTGGTTTAAGCTACTGTTGTTTCCTCCTGTTAGAACAAATCAACATTATATATATATTTTAAGTCAAGTTCTTTA
CG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889267 hypothetical protein ARALYDRAFT_477150 [Arabidopsis lyrata subsp. lyrata]8363e-087
NP_565248 uncharacterized protein [Arabidopsis thaliana]8158e-085
XP_002303864 predicted protein [Populus trichocarpa]6751e-068
XP_002512752 conserved hypothetical protein [Ricinus communis]6562e-066
XP_002297677 predicted protein [Populus trichocarpa]6429e-065

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SAG6 F23A5.30 protein8156e-085
B9GVV3 Predicted protein6751e-068
B9RGP3 Putative uncharacterized protein6562e-066
B9GLP2 Predicted protein6426e-065
C6SZ71 Putative uncharacterized protein6311e-063

Arabidopsis top hits (Blast detail)Scoree value
AT1G80940.1 unknown protein8216e-088
AT1G80940.2 unknown protein5359e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information