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Information for unigene UN46120

FASTA Sequence
Unigene ID: UN46120Length: 854 SSR 
GGATCGTCGTCAAGAGCCAGAGAGAGAGAGAGGAATCGGTTGTGTGTTGTCGAAGCTTCTTGGCTCTCTCTTCTCTTGTTAACGCG
CTTATCTCATCTGCGATCTCTCGTTGATCGGAGGATTTCCCGAGCTTCAGAGATCAACAATCATGGCCACCGCTGGAGGAAAATCA
AGTCTTGTGCTTCGATTCGTCAAAGATCAGTTTGTTGAATTCCAGGAATCAACGATAGGTGCAGCCTTCTTCTCTCAAACATTGGC
TGTCAATGATGCAACTGTCAAGTTTGAGATTTGGGATACTGCTGGTCAGGAACGTTACCATAGCTTGGCTCCTATGTACTACCGGG
GTGCTGCTGCTGCCATTATTGTCTTTGACATCACTAATCAAGCCTCATTTGAGAGGGCTAAGAAATGGGTTCAGGAACTTCAGGCA
CAAGGTAACCCTAATATGGTGATGGCTCTTGCTGGAAACAAAGCTGATTTATTGGATGCAAGGAAAGTGTCTGCCGAGGAGGCAGA
GACGTACGCACAAGAGAACAGCCTTTTCTTCATGGAAACCTCTGCTAAGACTGCAACAAATGCCAAAGACATCTTCTACGAAATCG
CAAAAAGGCTACCACGTGTACAGCCAGCAGAAAACCCAGCAGGAATGGTTCTCCCAAGCGGGCCAGCAGCTACTGCAGTGAGTAGT
TCATCATGTTGTGCTTAAGAGAGCTCTCTCTCTTGGTTAGTCACTGTAGAAAGGAAACATCCAGTCAGTGCCGGTCCCAGCATTTT
GTGGGCTGGAAGCTAAAATAATATATTGGGCCTGTTGATTAACACATTTAAGAGATAAATAAGGAAATATTGATTTGGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199326 Ras-related protein RHA1 [Arabidopsis thaliana]8684e-091
XP_002867930 hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp. lyrata]8192e-085
NP_193699 Ras-related small GTP-binding family protein [Arabidopsis thaliana]8164e-085
CAA50609 ras-related GTP-binding protein [Nicotiana tabacum]7923e-082
XP_002332129 predicted protein [Populus trichocarpa]7852e-081

Swiss-Prot top hits (Blast detail)Scoree value
P31582 Ras-related protein RHA18682e-092
P29687 Ras-related protein Rab57292e-076
P31583 Ras-related protein RHN17249e-076
Q0IIG7 Ras-related protein Rab-5A5805e-059
P18066 Ras-related protein Rab-5A5805e-059

TrEMBL top hits (Blast detail)Scoree value
Q9SN68 AT4g19640/F24J7_1908163e-085
Q40570 Ras-related GTP-binding protein7922e-082
B9NA46 Predicted protein7851e-081
A9P9C3 Putative uncharacterized protein7742e-080
B9ICG5 Predicted protein7643e-079

Arabidopsis top hits (Blast detail)Scoree value
AT5G45130.1 RHA1 (RAB HOMOLOG 1); GTP binding8701e-093
AT4G19640.1 ARA7; GTP binding8181e-087
AT3G54840.1 ARA6; GTP binding / GTPase4756e-048
AT3G54840.2 ARA6; GTP binding / GTPase4372e-043
AT1G16920.1 ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); GTP binding3762e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information