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Information for unigene UN46166
| FASTA Sequence |
| Unigene ID: UN46166 | Length: 1151 |
SSR | | ACACCAAACTTCACTTTCTCCGTTTTCATTTGTTGCTCCTTAGCCATCGTCTCCCATCTCAAATGCCTCCGTTGATGAAAAAAGGA
AGACACGGAAACTGGGCGGACCTTCCGCCTGAACTAACGTCTTCGATCTTGCTCCGTATTGGCGCGATTGAGATACTCGAAAACGC
ACAGAGGGTGTGCAGGTCGTGGCGTCGCGTTTGTAAAGACCCTTCGATGTGGCGTAAGATCGACATGCACAACCACGGAGACTTTG
ATTACGATCTCGAGATCATGTGTCGTCACGCGGTCGATCGCAGCCAAGGCGGCTTGGAAGAGATCGACATTTGGTACTTCGGTACT
GATGACCTCCTCAACTACATCGCCGTTAGGTCGAGTAAGCTGAAAAGCCTTAGGCTTTTAATGTGTGATGCATTAACAGACGAGGG
GTTTATGGAGGCAGTTGTGAAATTTCCTTTGCTTGAAAAACTTGAAGTGTCGTATTGCTCATTGTCAGAAGGGTCTCTGAAAGCTG
CAGGCCAGTCTTGTCCCAACCTGCAGACATTGAAGCTAAACAACGAACCTAGGTTCAAGTATGATGATGATGATGAAGCTCTAGCA
ATTGCAGAAACCATGCCTGGACTACGCCACCTCCAGTTTTTTGGAACCAGGTTAACCAACACGGGATTGAACGCTATTCTTGACGC
TTGTCCTCGCCTAGTACATCTTGACATACGCAAGTGTTTCCGTGTTGACTTTGATGGGGAGACAGCGAAACGATGTCTTGAGAGGG
TCAAAGAGTTGAGACAGCCTTGCGACCCAACCGATGATTTCCCTTTTGATGGTTTTGAGATGACCATAGAAGAAGAGGAAAAAGAA
GGTCTAGAGGAAGGTTACTCATATGACAGCGATGAGTACGTCTATGATGTCGATAATTGTTCTGACAGGTATGACTCGGGTGATGA
CTAGACAAGGTTAGGAGGTGGGATCGTTTTGAATAATGAAATAATGATATGATATCTGTAGCAAGTAGTGTTAATGAAACTCGTTG
TTGACCTCTTTTCGTGTTAGTTGGTTGTTTCAGTGGGACGTGTGTGTCCCTCTTTCTATGTCTTAGTCTATAGCTTCTGAGTGTGT
ATTCCTCGACTGAGTAAGAACATATTTAACACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874843 hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata] | 919 | 8e-097 |
| XP_002874842 F-box family protein [Arabidopsis lyrata subsp. lyrata] | 895 | 5e-094 |
| NP_567294 F-box protein SKIP19 [Arabidopsis thaliana] | 854 | 3e-089 |
| AAM65310 F-box protein family, AtFBL20 [Arabidopsis thaliana] | 850 | 8e-089 |
| XP_002863254 hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata] | 844 | 4e-088 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M0U9 F-box protein SKIP19 | 854 | 1e-090 |
| Q9S9V9 Putative F-box/LRR-repeat protein 23 | 823 | 5e-087 |
| Q9M0U6 Putative F-box/LRR-repeat protein 22 | 711 | 5e-074 |
| Q9S9V8 Putative F-box/LRR-repeat protein 9 | 632 | 7e-065 |
| Q9M0U7 Putative F-box protein At4g05480 | 438 | 2e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SKT5 Ubiquitin-protein ligase, putative | 705 | 4e-072 |
| A5ALT6 Putative uncharacterized protein | 662 | 4e-067 |
| C5YZK2 Putative uncharacterized protein Sb09g002930 | 534 | 2e-052 |
| B4G0W0 Putative uncharacterized protein | 531 | 6e-052 |
| B6TSC4 Ubiquitin-protein ligase | 523 | 5e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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