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Information for unigene UN46201
| FASTA Sequence |
| Unigene ID: UN46201 | Length: 720 |
SSR | | AAAAATAAAATAAAATTTATTGATAAATAAATTTTGGTTTACAAAACTAAACAAGAAAAAATAAAAATAAAGTAAACCACAACGGT
TTATCCAATTCGGTTTACACTAAACCGGAAAACCCTATACAAAAAAAAAACACTAAACCTAAAAAAAAAAACTCCAGCCGCCTTCA
ATCACGTCCATTAAGCTTCTTCATCGTCCTTCACCACCGGAATCTTCTTCATCTTCCTTCACCACCTGTATCTACTAAGAACAAAA
GAAGCACCGATTCTTATTCTTCTGATCCTCACCGGTGGAGTCTCTGATTCGTCATGGGTCCACTTCCGGCGACTCTGCTCAAGGGC
TGCTCACGACCACGCTGCTCGCAACCACAGACCAGCATCTCTGCTCACAACCTACGAGAAACAAAAAAAAAATAGATTCAATAGAG
ACGGAGAAAGAGAGATAACGAGAGAGAGAGAGAGAGACAGAGAAAGAGAGAGATAGCGAGACATGGACAAACAGAGGGAGAGAGAG
ATAACGAGACAGAGAGAAAGAGAGAAACAGAGACAGAGAGAAAAAAGAGAGAAACAGAGACAGAGAGAAAAAAGAGAGAGAGAGAG
AGAGTGACAGGGAGATACAGAGAAAGGAGATGATGAAGAGAGTGATACGGAGAAAAGAGATGTCTGTGTGAGATGAATCGCGAGAG
AGATGGTGAGAGATGAAGAGAGTGAAACCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_635459 hypothetical protein DDB_G0291063 [Dictyostelium discoideum AX4] | 221 | 3e-016 |
| EFA81560 hypothetical protein PPL_05549 [Polysphondylium pallidum PN500] | 219 | 5e-016 |
| XP_002425209 conserved hypothetical protein [Pediculus humanus corporis] | 218 | 7e-016 |
| CAG06679 unnamed protein product [Tetraodon nigroviridis] | 211 | 5e-015 |
| XP_001457647 hypothetical protein [Paramecium tetraurelia strain d4-2] | 210 | 6e-015 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5T200 Zinc finger CCCH domain-containing protein 13 | 210 | 3e-016 |
| Q86AH4 Putative uncharacterized protein DDB_G0271982 | 197 | 9e-015 |
| B2RY56 RNA-binding protein 25 | 193 | 3e-014 |
| P49756 RNA-binding protein 25 | 188 | 1e-013 |
| P93008 DEAD-box ATP-dependent RNA helicase 21 | 175 | 3e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q54F78 Putative uncharacterized protein thoc2 | 221 | 2e-016 |
| D3BAH3 Putative uncharacterized protein trfA | 219 | 4e-016 |
| Q4RY53 Chromosome 3 SCAF14978, whole genome shotgun sequence. (Fragment) | 211 | 3e-015 |
| A0E4N3 Chromosome undetermined scaffold_78, whole genome shotgun sequence | 210 | 4e-015 |
| B3L1H1 Protein kinase, putative | 208 | 7e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G33730.1 DEAD box RNA helicase, putative | 184 | 3e-014 |
| AT2G03150.1 emb1579 (embryo defective 1579); binding / calcium ion binding | 163 | 8e-012 |
| AT1G20920.1 DEAD box RNA helicase, putative | 158 | 3e-011 |
| AT1G60900.1 U2 snRNP auxiliary factor large subunit, putative | 157 | 4e-011 |
| AT5G67320.1 HOS15 (high expression of osmotically responsive genes 15) | 146 | 7e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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