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Information for unigene UN46271
| FASTA Sequence |
| Unigene ID: UN46271 | Length: 761 |
SSR | | GGACTCGCATACTTTTCAACAATCCCACGATACCCCCATCCCACCCAGATCGATAAGCAAGCAACCTCCCAAACTAAAAATTTTCA
TTTTTTCCCGATTCAGATCAAACCGCGCACCATCGCCGTTGCCTCCGCCACTTTCTGCTAAATCCAGTCAGAAGAGAGAGAGAGGA
TGGGAGCATTCGCATCGAGGTTTTGGTTCATGATGTTCCCTGCGAAAGAGTATAAGATCGTCGTCGTTGGTTTGGATAACGCCGGC
AAAACGACGACGCTTTATAAGCTTCACTTGGGTGCAGTTGTCACCACTCATCCTACTGTCGGAAGCAGTGTCGAAGAGCTCGTTTA
CAAGAACATCCGCTTCGAGGTTTGGGATCTTGGTGGGCAAGACAGGCTCAGAACCTCATGGGCAACTTACTACAGAGGCACGAACG
CTGTAATCGTGGTTATCGACAGCACAGACAGAGCCAGGATCTCTTTGATGAAAGATGAGCTTTCCAGATTACTCGGGCACGAGGAT
CTTCAGAACTCGGTGATACTCGTGTTCGCAAACAAACAGGACCTGAAGGATGCTATGAGCCCAGCTGAGATCACGGACGCGCTTAA
CCTTCACAGCATCAAGAGCCATGATTGGCACATTCAAGCAAGCTGTGCAGTCACCGGAGAAAGGTTGCATGATGGGCTTGGCTGGA
TTGCCAGAAGTACTGAGAAACCTCCAAGTAAAGAGGAATGTCAGAACGATCACATACATGACTTTCGCATTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188935 ADP-ribosylation factor C1 [Arabidopsis thaliana] | 864 | 1e-090 |
| XP_002885533 ADP-ribosylation factor C1 [Arabidopsis lyrata subsp. lyrata] | 860 | 3e-090 |
| XP_002322463 predicted protein [Populus trichocarpa] | 843 | 3e-088 |
| XP_002517045 ADP-ribosylation factor, putative [Ricinus communis] | 836 | 2e-087 |
| XP_002283837 PREDICTED: hypothetical protein [Vitis vinifera] | 830 | 9e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q55AD9 ADP-ribosylation factor-like protein 5 | 565 | 2e-057 |
| P11076 ADP-ribosylation factor 1 | 524 | 1e-052 |
| P19146 ADP-ribosylation factor 2 | 520 | 4e-052 |
| Q9Y689 ADP-ribosylation factor-like protein 5A | 515 | 1e-051 |
| P51646 ADP-ribosylation factor-like protein 5A | 515 | 1e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LIK1 ADP-ribosylation factor, putative | 864 | 7e-091 |
| A9PG62 Predicted protein | 843 | 2e-088 |
| B9RTH6 ADP-ribosylation factor, putative | 836 | 1e-087 |
| B9I4A4 Predicted protein | 822 | 5e-086 |
| C6T2I8 Putative uncharacterized protein | 811 | 9e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G22950.1 ATARFC1 (ADP-ribosylation factor C1); GTP binding | 864 | 4e-093 |
| AT1G70490.1 ARFA1D; GTP binding / phospholipase activator/ protein binding | 496 | 2e-050 |
| AT1G23490.1 ATARF1 (ADP-RIBOSYLATION FACTOR 1); GTP binding / phospholipase activator/ protein binding | 496 | 2e-050 |
| AT1G10630.1 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F); GTP binding / copper ion binding / phospholipase activator/ protein binding | 496 | 2e-050 |
| AT1G70490.3 ARFA1D; GTP binding / phospholipase activator/ protein binding | 496 | 2e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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