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Information for unigene UN46278
| FASTA Sequence |
| Unigene ID: UN46278 | Length: 1081 |
SSR | | GGGTTTTATTGTTGTTTAGTCTTTAATAGATCTCTAGTTTTCTCGCGAAATCCTGTGATTAGAGTCGGTGGGATCGGATCGGAGCC
GAATCGAATCTAGTCGAGGATTTAGGGTTTGAGAAAGAAAGAGAAAAAAAATGGCGCAGCAGCAGCAATCGCTGATCTACAGTTTC
GTGGCTCGAGGGACGGTGATCCTGGTGGAGTTCACTGATTTCAAAGGCAACTTCACATCCATCGCTACACAGTGCCTCCAGAAGCT
CCCCTCTTCCAACAACAAGTTCACTTACAACTGCGACGGCCACACCTTCAACTACCTCGTCGAAGATGGATTCACGTATTGTGTTG
TTGCGGTTGAATCTGCTGGGAGGCAGATTCCGATGGCGTTTTTGGAGAGAGTGAAGGAGGATTTTAACAAGAGATATGGTGGTGGG
AAGGCTGCCACTGCTCAAGCTAACAGCTTGAATAAAGAGTTTGGGTACTCTTTTTTTTTCTCTCTCTCTCTTTCTCATTACTCTTT
TTGGACTGACTCTGTTTTTTTGGTTGCTTTTGAAGGTCTAAGCTGAAGGAGCAAATGCAGTATTGTATGGATCATCCTGATGAGAT
TAGCAAGCTTGCTAAGGTGAAGGCGCAGGTGTCTGAAGTTAAGGGTGTTATGATGGAGAACATCGAGAAGGTTCTTGACCGTGGTG
AGAAGATTGAGCTTCTGGTGGACAAAACCGAGAACCTTCGTTCACAGGCACAAGATTTCAGAACAACGGGGACGCAGATGAGAAGA
AAGATGTGGCTTCAAAACATGAAGATAAAACTCATAGTTCTCGCCATCATTGTCGCCTTGATTCTCATTATCGTCCTCTCAGTTTG
CCACGGCTTCAAATGCTAAACTCAGAAAAAAATTCAAAAACTCTCTTGAGAATGGATCTTTCTCACTCGGTACATTGGTACTGCCT
TTTGCTTTTATTGTCCTATCATCATTATCATTCTAATGTTTGCCCCTTGAATTGGTTTTTGTATAGATAGACATATATATGTATGC
TTCATATTTTGCTATATTGCTTGCATAATATACAAAGAATATCATAGCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892239 vesicle-associated membrane protein 7B [Arabidopsis lyrata subsp. lyrata] | 562 | 2e-055 |
| NP_171967 vesicle-associated membrane protein 721 [Arabidopsis thaliana] | 559 | 4e-055 |
| BAD43410 putative vesicle-associated membrane protein, synaptobrevin 7B [Arabidopsis thaliana] | 559 | 4e-055 |
| NP_180871 vesicle-associated membrane protein 722 [Arabidopsis thaliana] | 557 | 7e-055 |
| AAA56991 formerly called HAT24; synaptobrevin-related protein [Arabidopsis thaliana] | 557 | 7e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZTW3 Vesicle-associated membrane protein 721 | 559 | 2e-056 |
| P47192 Vesicle-associated membrane protein 722 | 557 | 3e-056 |
| O48850 Vesicle-associated membrane protein 725 | 535 | 1e-053 |
| Q9MAS5 Putative vesicle-associated membrane protein 726 | 529 | 6e-053 |
| Q8VY69 Vesicle-associated membrane protein 723 | 497 | 3e-049 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q681H0 Putative vesicle-associated membrane protein, synaptobrevin 7B | 559 | 3e-055 |
| Q681L9 Putative vesicle-associated membrane protein, synaptobrevin 7B | 559 | 3e-055 |
| Q67YV9 Putative vesicle-associated membrane protein, synaptobrevin 7B | 534 | 2e-052 |
| B9H095 Predicted protein | 533 | 3e-052 |
| B9RWK6 Vesicle-associated membrane protein, putative | 525 | 3e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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