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Information for unigene UN46299
| FASTA Sequence |
| Unigene ID: UN46299 | Length: 899 |
SSR | | GGAAGGACAGGATCAAACTCACACACACAAAAGAAGCAAGAAAACTATTTTTGATATACAGAGAGAGAGAGAGAGAGATGGAGAAG
ATGAAGTGTGAGCTATGCGACGGTGTGGCGTGGATGTTCTGTGAGTCAGACCAGGCGAGTTTATGCTGGGACTGCGACGGTTACGT
TCACGGAGCTAACTTTCTGGTGGCTAAACACGCGCGCTGCCTTCTTTGTAGCACGTGCCAGTCTCCTACGGCTTGGAAAGCTTCGG
GTCTTCGACTATGTCCAACAGTTTCCAACTGCGAGCCTTGCCTTGCTCGTAAGAATAGTAACGGAGAAGACGACGGCGCAGAGTCT
TATGATGAGGATGAGGAGGAAGAAGAAGAAGAAAGTGATGATGAGGTAGAGGAAGAAGAAGGGGAGAATCAGGTGGTGCCGTGGGA
TGCGGCTGCGGCTGTGCAAGAACCTCCAGTGATGAGTTCTTGGCGTTCCGTTAGCAGCGGAGGAGAAGAACGTTTCAGTTTGGTAG
AGAAAAGGACGCGACAAGATTTAGATCTTAACTCCTCCCATGATGAATCAAACGAGTCACGACCGTTGAAACGGCTAACGAGAGAT
GAAACCTGGCCAAGATCAACGGCTATGATGAAATCAACCTTAAAAATCAAACGACTGTGATACACCACCAACATAAATAAAATGCC
AGCCGTTGATTTCTGCTTATTCAGATTAGATTAATCATCACTGTTCATTGCAAACAGTTCATCTTTTAGTTAATTGAGTTTAGCTA
CCTTTATGGCTTAGTCTGCTTACTGTTTTTTCTGAAACCAAATGTACTGGTTGAACCCATTTTGCTTAGCTGCTTACGATTTCGTA
TTTTTGGTTGTATTATTCACCTATCTATAATTATGTTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200258 B-box type zinc finger-containing protein [Arabidopsis thaliana] | 564 | 8e-056 |
| XP_002866044 hypothetical protein ARALYDRAFT_495528 [Arabidopsis lyrata subsp. lyrata] | 564 | 8e-056 |
| BAA97520 unnamed protein product [Arabidopsis thaliana] | 488 | 5e-047 |
| XP_002869569 hypothetical protein ARALYDRAFT_913814 [Arabidopsis lyrata subsp. lyrata] | 470 | 7e-045 |
| CBI20403 unnamed protein product [Vitis vinifera] | 428 | 5e-040 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SK53 Zinc finger protein CONSTANS-LIKE 3 | 133 | 3e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q6NLH4 At5g54470 | 564 | 6e-056 |
| Q9LSQ8 Genomic DNA, chromosome 5, BAC clone:F24B18 | 488 | 4e-047 |
| B9SIH7 Transcription factor, putative | 367 | 4e-033 |
| O81834 Putative uncharacterized protein AT4g27310 | 360 | 3e-032 |
| Q8VYJ8 AT4g27310/M4I22_120 | 357 | 6e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G54470.1 zinc finger (B-box type) family protein | 567 | 1e-058 |
| AT4G27310.1 zinc finger (B-box type) family protein | 360 | 2e-034 |
| AT3G21890.1 zinc finger (B-box type) family protein | 173 | 7e-013 |
| AT4G15248.1 zinc ion binding | 147 | 8e-010 |
| AT2G24790.2 COL3 (CONSTANS-LIKE 3); protein binding / transcription factor/ zinc ion binding | 133 | 3e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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