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Information for unigene UN46325

FASTA Sequence
Unigene ID: UN46325Length: 720 SSR 
GGATTCATTAAGTTCCTTTTACCCCTTCCTTCTCTCTCAAAAAAAAAAATTCCAAATACCATTTTTTCTCCAAGTATCACTTATTC
CAAAATATGAAATTTAGAACAATTTCATTACCTATATCTATAGGAATTGCCATAATAGCCATTTTAGCATCCAAAACTCTATTTGA
CACAGATCCTAGAGCCTTCATGCACAATCCTTTCAATGTTCTGCATACAATCAAAGCTATATCATATTCAGCTATAACTTCCGTTT
ACAGCGGCTGCCACCACCACCACCACCATCATCATCATCATCACCCTCAAAAACCATCTGATACCAAAAAGAAAGTAACAATATGC
GACGATTTCCCCAAAAATATACCTCCACCTGACACGGACCCGACTTCATATCTCTGCGTGGATAAGAAAGGCTGCTGCAATTTCAC
GACCGTGCAATCAGCCGTGGACGCAATCGGAAATTATAGTCAGAGAAGAAACGTGATATGGATCAACTCCGTCATGTACTATGAAA
AAGTGGTGATTCCGAAAACTAAGCCAAGTATCACGTTACAAGGACAAGGGTTCGAGACGACAGCCATAGCTTGGAACGATACGGCC
TACTCGGCTAACGGCACTTTTTATTGTGCCACGGTCCAAGTCTTTGGTTCTCAGTTCGTCGCTAAGAACATTAGTTTCATGAACAT
GGCTCCGATACCGAAGCCTGGAGATGTAGAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892282 predicted protein [Arabidopsis lyrata subsp. lyrata]9411e-099
NP_172023 putative pectinesterase 8 [Arabidopsis thaliana]7886e-082
AAB71446 Similar to Prunus pectinesterase (gb|X95991) [Arabidopsis thaliana]7572e-078
XP_002521065 Pectinesterase-1 precursor, putative [Ricinus communis]5663e-056
ABN08648 Pectinesterase [Medicago truncatula]5521e-054

Swiss-Prot top hits (Blast detail)Scoree value
O23038 Probable pectinesterase 88716e-093
Q9ZQA3 Probable pectinesterase 153081e-027
Q9ZQA4 Putative pectinesterase 142372e-019
Q8LPF3 Probable pectinesterase 681952e-014
O81415 Probable pectinesterase/pectinesterase inhibitor 391638e-011

TrEMBL top hits (Blast detail)Scoree value
B9S4Z6 Pectinesterase5662e-056
A2Q4U8 Pectinesterase5529e-055
A5CB25 Putative uncharacterized protein (Fragment)5375e-053
B9IHB0 Pectinesterase5341e-052
C5YIK0 Pectinesterase4783e-046

Arabidopsis top hits (Blast detail)Scoree value
AT1G05310.1 pectinesterase family protein8716e-094
AT2G36710.1 pectinesterase family protein3081e-028
AT2G36700.1 pectinesterase family protein2372e-020
AT5G47500.1 pectinesterase family protein1951e-015
AT4G02300.1 pectinesterase family protein1637e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
61  50%

Unigene MembersMember information