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Information for unigene UN46418

FASTA Sequence
Unigene ID: UN46418Length: 606 SSR 
GGAAGCAAGTTCACATCCAAATATGCAACTGAAGAAGAAATCAGCAGCAGCAGCAGCAGCAACGAGAAGAAGAGTTGCGCTATTTG
CGGTACTAGCAAAACCCCTCTTTGGCGTAGCGGTCCCACTGGTCCCAAGTCGCTATGTAACGCATGCGGGATCAGGAACAAGAAGA
AGAAAAGTACTGTGAAGAATAAGAAGAAGACTCACACTAGGAATAATCCAAAGCTTGGTGACTCGTTGAAGCAGAGATTGTTGGAG
TTAGGGAGAGAAGTTATGATGCAGCGATCCAGGGATGGAGGAGATCAACGGCGGAAGAAGCTCGGCGAGGAAGAGCAAGCTGCTGT
GCTGCTCATGTCTCTCTCTTATGCCTCTTCTGTTTATGCTTAACGAATTATCTCTCTCGATCTCACCGATTTGGAGTTTAATAATT
AATTAAGTTCAGTATATTCTTTTTTCAAATTCTGAGAGTATTAGTTAGCTAACGAGTTAGTTTGTGATTCTTGTTTAATTTACTTA
TTTTATCTGATTTTTTTTTTGTATTTTGGTTTATGTGATATGTAGTAAGAAAACCGGAAAGATCAAGAAATAAGATGATTTTTCAG
TCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882490 hypothetical protein ARALYDRAFT_477989 [Arabidopsis lyrata subsp. lyrata]4498e-043
NP_566290 GATA transcription factor 15 [Arabidopsis thaliana]4471e-042
AAF63824 hypothetical protein [Arabidopsis thaliana]4471e-042
AAM61093 unknown [Arabidopsis thaliana]4443e-042
XP_002315462 predicted protein [Populus trichocarpa]3224e-028

Swiss-Prot top hits (Blast detail)Scoree value
Q8LG10 GATA transcription factor 154477e-044
Q9FJ10 GATA transcription factor 163161e-028
Q9LIB5 GATA transcription factor 171806e-013
Q5HZ36 GATA transcription factor 211653e-011
Q8LC59 GATA transcription factor 231546e-010

TrEMBL top hits (Blast detail)Scoree value
B9HX95 Predicted protein3223e-028
C0SVS9 Putative uncharacterized protein At5g49300 (Fragment)3161e-027
A5BCR3 Putative uncharacterized protein3072e-026
B9MZZ3 Predicted protein2632e-021
C6T5X2 Putative uncharacterized protein2094e-015

Arabidopsis top hits (Blast detail)Scoree value
AT3G06740.1 zinc finger (GATA type) family protein4485e-045
AT5G49300.1 zinc finger (GATA type) family protein3161e-029
AT4G16141.1 sequence-specific DNA binding / transcription factor/ zinc ion binding1887e-015
AT3G16870.1 zinc finger (GATA type) family protein1806e-014
AT5G56860.1 GNC (GATA, nitrate-inducible, carbon metabolism-involved); transcription factor1653e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information