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Information for unigene UN46419
| FASTA Sequence |
| Unigene ID: UN46419 | Length: 866 |
SSR | | GGAAATGGAAGGATGGGATCCGAGCACGAAGTCGACGCTAACGCGGATCCCTCTTCTGACAACAAAAGCGGGACCAAGAGACGGCG
ATGCATGGAAACAGAGGCTTAAAGAGGAGTACAAGTCACTGATCGCGTATACACAGATGAACAAGTCCTACGACAATGACTGGTTC
CGCATCTCCGCCTCTAACCCCGAAGGTACGCGTTGGACTGGCAAGTGTTGGTACGTTCACAACCTCCTCAAATACGAGTTCGATCT
CCAATTCGATATCCCCGTCACCTACCCTGCAACTGCTCCCGAGCTTGAGTTGCCTCAGATTGACGGCAAAACCCAAAAGGTTAGGG
CGGCTTTCTAGGTTTCTTCTCTATTTGAGTTTGGTCTGTCTTTAATTGATCTTTTTCTCTCTCTCTCTTGGTTTTATGTAGATGTA
TCGAGGTGGGAAGATTTGCCTGACTGTTCATTTCAAGCCACTCTGGGCTAAAAACTGTCCTAGGTTTGGTATAGCACATGCACTTT
GTTTGGGGCTTGCTCCATGGCTTGCTGCAGAGATTCCAATCCTTGTGGACTCTGGCATGATTAAGCACAAAGATGACGCAGCCTCC
TCTACTGAATCTTAAGTCTATCTATCTCAGAGTTGAGAGGTTATGTTAGTCAGTTATAGCTGAACTCATAAATTTCTGAAGCGGAT
GGTCTTCTCTATAAAAAGCTTACATGAAACCCAATAAAGAATTAAGCTATTGCAGTGTTTAATCTTGAAAAACTTGTACAATTCGA
GAACACTGGTTCGTGCAAGGTGTGGATATTGTTATTACGAACCTTTTTATTGCTGTTTTTTTTTTGGTAAATCGAACACTAAAATT
GAGGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564289 ubiquitin-fold modifier-conjugating enzyme 1 [Arabidopsis thaliana] | 583 | 5e-058 |
| AAN65067 Similar to CGI-126 protein [Arabidopsis thaliana] | 583 | 5e-058 |
| ACU16907 unknown [Glycine max] | 571 | 1e-056 |
| XP_002509999 Ufm1-conjugating enzyme, putative [Ricinus communis] | 564 | 8e-056 |
| XP_002301104 predicted protein [Populus trichocarpa] | 563 | 1e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SXC8 Ubiquitin-fold modifier-conjugating enzyme 1 | 583 | 2e-059 |
| A2Z5S8 Ubiquitin-fold modifier-conjugating enzyme 1 | 482 | 1e-047 |
| Q8S625 Ubiquitin-fold modifier-conjugating enzyme 1 | 482 | 1e-047 |
| Q178A5 Ubiquitin-fold modifier-conjugating enzyme 1 | 428 | 2e-041 |
| A7SM54 Ubiquitin-fold modifier-conjugating enzyme 1 | 420 | 2e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6T5A5 Putative uncharacterized protein | 571 | 8e-057 |
| B9R6Q6 Ufm1-conjugating enzyme, putative | 564 | 5e-056 |
| A9PCY0 Predicted protein | 563 | 7e-056 |
| C6SXY5 Putative uncharacterized protein | 558 | 3e-055 |
| A5BZY4 Putative uncharacterized protein | 533 | 2e-052 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G27530.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 183 Blast hits to 183 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). | 583 | 2e-060 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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