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Information for unigene UN46440

FASTA Sequence
Unigene ID: UN46440Length: 1003 SSR 
GACAATATCACATTGTCTTTCTCTTCTCCCTATCACACTACACAACACATCATGGCTTTCTCCACTAGAACCAGCTCCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCACAACACTTGTTCTTCTTTCCACTCAAATCAATGCAAGAGATAGCAACTTCTTTGGAAAAT
TCCACCGAGAATCCTCCAAAGACCAAAGCCCTAACAATGTCCTCCCTCTCAAGACCAGCCAAAAAACCACAGTAGAAGAGTCCTTC
CCAAACAAGAAAGACCAAGAACAAGACCCTACCTTTGTCCCCGAGTCCGAAAACGGCTATGGCTTATATGGTCACGAGACCACCTA
CAACAACAACAAAGAAGAGTTCAACAACAACAAGTACGATGAAAAGTTCAACGGTGAGACTTTCTCAACTCCAAGACTGAGCGAGA
CCGAAGAGTCTTACAACAACTACGACGAGAAGTACCCCAAGAAGACGGAGAGCTACGACAACAAGGAAGAGTTCAACCAAAAGTAC
GATGAAAACGTCAAGGAAGAGTCTTTCTCTGAGAACAATGAAGACAAGAGAAGCTTCTACAACTCAAACGCTTACGGAACCGAGTT
AGAACGTGAAACGCCGTACAAAGGTTACAGCCACAATATGGAGAGACAAGGCATGAGTGACACAAGATTCATGGAGAAAGGTAACT
ACTATTACGACCTTTACAACGATAGAAACCACGGCCATTTCTACCGGAAGCCTCATCAGAAAAGCCCTGCCGGTTATTATTCTTCT
CAGGCGACCGAGAATAACTACGACCAGTCGTACAACAACTACAACAACGAGGAGGAGAAGAGCTTCAAGGATCCTTACAACTCTAA
GTGGGAGAAGAACATGATGAATGAACAGCCTGAGGAGTTCGATGAGGAGCAAGGAGACCAGTTCAAGCCTTGATGAATACTACACT
CTTGAAAGTATTTTTCTTTTATTTCAGCTAAGTTATGTTACGTATGGTTGATTAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893529 hypothetical protein ARALYDRAFT_473059 [Arabidopsis lyrata subsp. lyrata]7092e-072
NP_174162 uncharacterized protein [Arabidopsis thaliana]7063e-072
XP_002881311 hypothetical protein ARALYDRAFT_482341 [Arabidopsis lyrata subsp. lyrata]6142e-061
NP_565775 uncharacterized protein [Arabidopsis thaliana]6071e-060
AAM60840 unknown [Arabidopsis thaliana]6042e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q01197 Protein E62795e-024
Q6S6W0 Glycoprotein gp21782e-012
P28968 Glycoprotein gp21612e-010
P38739 Cell wall integrity and stress response component 41577e-010
P47179 Cell wall protein DAN41415e-008

TrEMBL top hits (Blast detail)Scoree value
Q9SGN8 F3M18.167062e-072
P93019 Expressed protein6077e-061
Q8LGJ1 Putative uncharacterized protein6042e-060
Q39361 Putative uncharacterized protein3863e-035
Q39360 Brassica napus (clone PIS63-1)3782e-034

Arabidopsis top hits (Blast detail)Scoree value
AT1G28400.1 unknown protein7071e-074
AT2G33850.1 unknown protein6121e-063
AT1G03820.1 unknown protein1442e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information