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Information for unigene UN46455

FASTA Sequence
Unigene ID: UN46455Length: 660 SSR 
GGAAAAAGAGAGAGAGAGAAAAAAGAGATGAGAGATGAGTTCTTCACAGGCACGGCTAAGTCAAGCTTTCATTGTGCTTCTGCTTC
TTTGCGTCATAAATTGCTTTACCGGAATCTGAAGGATCATTTCTTCCAGTTGGCATGGCGCCCAAGACCTCCATCATTCTTGTCTC
CAGAGAAGGAAGAAGAGATAGCAAAGAACCTGAAGAAGTACAGCAAGAAGTACGAGTTAGAGGATCAGGACGTGTCGTTGCTCTTG
AGTGAACAAGACAGGGAGAAGAGGAAGGCGTTGAAGGAAGAGTGGGAGAAATGGGTGAAGCAGTGGAAGTCGCTGCAGGAAGAGGA
GAAACTTGCGAGGCAAAACCTCAGGGATGGAGAAATCAGTGATGAGGAAGAAGAAGAGGATGAAGCCAAAGAAGTCAAAGAAGTTG
AGTTTGAGGATGTTATTGACGTCACTGAAGAAGTCGTCCAAGAATGAATGCAAGTTTCCTCCCCACTTCAATAAGTGTCATTCTCC
TTTCCTTTTCCTGTCCTTTGGATCACTCTTTAGACATCTATCAAACTGTTTCTTTCTTTTTTGTTATCGTCTTCTGTTCGTTGAAG
TTTTAGAATTTTCAATTTTGTTTCCTTGGATATTATTATGTTCTTAATCTAGTTTCGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874327 hypothetical protein ARALYDRAFT_351685 [Arabidopsis lyrata subsp. lyrata]5502e-054
XP_002872264 TIF3B1 [Arabidopsis lyrata subsp. lyrata]5422e-053
XP_002874283 TIF3B1 [Arabidopsis lyrata subsp. lyrata]5394e-053
NP_568498 translation initiation factor 3 subunit B [Arabidopsis thaliana]5368e-053
NP_001031954 translation initiation factor 3 subunit B [Arabidopsis thaliana]5368e-053

Swiss-Prot top hits (Blast detail)Scoree value
Q9C5Z1 Eukaryotic translation initiation factor 3 subunit B5364e-054
P56821 Eukaryotic translation initiation factor 3 subunit B4891e-048
A7MB16 Eukaryotic translation initiation factor 3 subunit B2156e-017
P55884 Eukaryotic translation initiation factor 3 subunit B2121e-016
Q569Z1 Eukaryotic translation initiation factor 3 subunit B2102e-016

TrEMBL top hits (Blast detail)Scoree value
Q2V341 Putative uncharacterized protein At5g27640.25365e-053
Q56ZP3 TRANSLATION INITIATION FACTOR 3 SUBUNIT 9-like protein5365e-053
Q8GUM1 Eukaryotic translation initiation factor-like protein5161e-050
Q9M4T6 EIF3b5161e-050
A5BDZ1 Putative uncharacterized protein4863e-047

Arabidopsis top hits (Blast detail)Scoree value
AT5G27640.1 TIF3B1 (TRANSLATION INITIATION FACTOR 3B1); nucleic acid binding / translation initiation factor5463e-056
AT5G27640.2 TIF3B1 (TRANSLATION INITIATION FACTOR 3B1); nucleic acid binding / translation initiation factor5463e-056
AT5G25780.1 EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2); nucleic acid binding / protein binding / translation initiation factor5222e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information