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Information for unigene UN46471

FASTA Sequence
Unigene ID: UN46471Length: 734 SSR 
GGACCTCGTCCTTGTAGCCTCTCTCTCTCTGTCTAAGATTTAAAAAAAAAGGAGCTTTTGCTTTTACTTAGTTTCCAAGGCAATTC
AACATGTCTGGTGATGAAGCTGCTGCTGCCGCTCCTACTGTTGTTCCTCCGGTTGCTGAGGCAGCTGTCATTCCAGAGGACATGGG
TCTGTTGACTGCATTGGAGTTGACGCTAAGGAAAGCTCGTGCTCACGGTGGTGTGGTTCGTGGTCTCCATGAAAGCGCTAAGCTTA
TCGAGAAGCGTTCTGCTCAGCTCTGTGTCTTGGCCGAAGATTGCAACCAGCCTGATTACGTCAAGCTGGTGAAGGCTCTTTGCGCT
GATCATAGCATCAACTTGCTTACTGTTCCAAGCGCCAAAACCCTCGGAGAGTGGGCTGGTCTTTGCAAGATTGATTCAGAGGGCAA
TGCAAGGAAGGTAGTTGGATGCTCGTGCCTTGTTGTCAAGGATTACGGTGAGGAGACAACTGCACTCAACATCGTGAAGAAGCATA
TTGAATCTAACTAAAATCAGCAAAAGTCGGATCTCTCACCATATGCTTCCATTCCCAAAAGAAAACCCATTTCATTTTTCTTGTGT
CCACTTTCTGTTCCTCTTTTGTCTTCTTCGTTGTTTTTGATATTGAATACAGAACTTGTTAGTCGACAGGTCTTGAGATTTGTTTG
GAAAATGAAGTTTTGGTTTTAACTAGGCTGCTGGCTCTCTTCATTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180766 40S ribosomal protein S12-2 [Arabidopsis thaliana]6542e-066
XP_002887897 predicted protein [Arabidopsis lyrata subsp. lyrata]6149e-062
NP_173045 40S ribosomal protein S12-1 [Arabidopsis thaliana]6103e-061
XP_002890138 40S ribosomal protein S12 [Arabidopsis lyrata subsp. lyrata]5825e-058
XP_002881214 40S ribosomal protein S12 [Arabidopsis lyrata subsp. lyrata]5744e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q9SKZ3 40S ribosomal protein S12-26541e-067
Q9S9P1 40S ribosomal protein S12-16101e-062
Q9XHS0 40S ribosomal protein S125071e-050
Q76I81 40S ribosomal protein S123653e-034
P84175 40S ribosomal protein S123653e-034

TrEMBL top hits (Blast detail)Scoree value
B9S6H9 40S ribosomal protein S125554e-055
B9GT02 40S ribosomal protein S125546e-055
A9P9K3 40S ribosomal protein S125431e-053
A9PDC2 40S ribosomal protein S125402e-053
A9PJY6 40S ribosomal protein S125359e-053

Arabidopsis top hits (Blast detail)Scoree value
AT2G32060.1 40S ribosomal protein S12 (RPS12C)6557e-069
AT2G32060.3 40S ribosomal protein S12 (RPS12C)6557e-069
AT2G32060.2 40S ribosomal protein S12 (RPS12C)6557e-069
AT1G15930.2 40S ribosomal protein S12 (RPS12A)6119e-064
AT1G15930.1 40S ribosomal protein S12 (RPS12A)6119e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information