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Information for unigene UN46508
| FASTA Sequence |
| Unigene ID: UN46508 | Length: 960 |
SSR | | GGAGCGCAGCACACCTTTCTTTGCACAAACCCTAGAAGAATCCTCCGGAAATGTCGTTATTATTTTGTCGAGCTTCTTCGTCTACA
GTTGCCGCTCGTCCCTTCAGAGCGGTTAGATCTCCGGTGAATCTCCGAGCTGGTGCCCAGAGAGTGACTCTTGGTGGTGGTAGCTA
TCAGTTCAGCCGCTCATCATCGCTGATGTCATTCTCGAGGGGTTCGAAGCTAAGTGCTATCACCGCCGACGCTAATCTGGTTAGCG
TTCTCGAATCTGAAATCGAAGGCACCTTTGTTAACGAAGATCCTGAGTTGCCAGAAGGGTTTCCTTTCCGCATCAATGATCTGACA
TGGCAACAAGATATACGTATGATTAGAGAGTTTAAGGATGAAACCATTTTTGTCGAAATTGACCCTTATGCGCCGTTTGATAAGGA
AGAACTATTAAAAGAAGGAATTGCCATGATCATCAATGTTACGAAAAAAGATGATGGTCCCTGTCTTGAGTTTGAAGTCGAAGCTT
TTGTATGCGTCCTACAACCCCATGAACCTACGTACCCCTACAAAGGCCCTGACTTTGAGTATGTTTTGATTTACTGCCCTCTTTCT
CTCTCTCTCTCTCTAGATATATATGTCTATGAGATTTGATATGTTATTTGACTGGCTTTTGGGTTTTTTTGGCAGTGACTTGGATG
AGAATTTGCAAAAGGCTTTCCACAGGTTTTTGGAGATCAGAGGGTTCAAGCCCACCATCACTGAGTTTATGGCTGATTATATGGCC
AACAAAGACAGCAGGGAGCGTCGTCAGTGGCTCTATGATGTCCAGTCTTTTGTTGAGATGTGAAATTTTTAGGTGAAAATTTATCT
TGGATGAACTTGTTATCACCATTATCTTGCAATGAGTTGCTAGTTGTTTTGACAATATTTGTTTCAATTTCCCCAATGAAAACTTG
TCACTTTTCGTTAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM64272 unknown [Arabidopsis thaliana] | 210 | 1e-014 |
| NP_195825 Mitochondrial glycoprotein family protein [Arabidopsis thaliana] | 210 | 1e-014 |
| XP_002873035 mitochondrial glycoprotein family protein [Arabidopsis lyrata subsp. lyrata] | 210 | 1e-014 |
| XP_002529868 Mitochondrial acidic protein MAM33, mitochondrial precursor, putative [Ricinus communis] | 182 | 2e-011 |
| XP_002282374 PREDICTED: hypothetical protein [Vitis vinifera] | 181 | 2e-011 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W487 Uncharacterized protein At2g39795, mitochondrial | 142 | 3e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LD55 Putative uncharacterized protein | 210 | 7e-015 |
| Q9LZM6 At5g02050 | 210 | 7e-015 |
| B9SV49 Mitochondrial acidic protein MAM33, mitochondrial, putative | 182 | 1e-011 |
| B9HC44 Predicted protein | 169 | 4e-010 |
| B9IFX9 Predicted protein | 169 | 4e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G02050.1 mitochondrial glycoprotein family protein / MAM33 family protein | 246 | 3e-021 |
| AT5G05990.1 mitochondrial glycoprotein family protein / MAM33 family protein | 159 | 3e-011 |
| AT3G55605.1 mitochondrial glycoprotein family protein / MAM33 family protein | 149 | 5e-010 |
| AT2G39795.1 mitochondrial glycoprotein family protein / MAM33 family protein | 143 | 2e-009 |
| AT1G15870.1 mitochondrial glycoprotein family protein / MAM33 family protein | 116 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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