RadishBase

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Information for unigene UN46532

FASTA Sequence

Unigene ID: UN46532	Length: 779	SSR
GGAAAACAGGACTTGTTCAAGTATATCAGAGAATTCGAGAAAGAAGAAGAAGAAGAATTTGGTGAAAGATGGAGATGGAGCCGACA CGAGTGATGGTGGCTGTGAACGAATCGACGATCAAAGGGAAGCCTCACCCTTCGATAAGCAGCAAAAGAGCTTTCGAATGGACTCT GGAGAAAATGGTCCGATCCAACACTAGCGATTTCAAGATTCTCTTGCTACATGTACATGTTGTGGACGAAGACGGTTTTGATGAGG TAGACAGCATATATGCGTCTCCTGATGATTTCAGAGACATGAGAGAGTCTAACAAGTCTAAAGGTCTTCACCTTCTCGAGTATTTC GTTACAAAATGTCATGAGATTGGGGTTAGTTGCGAGGCATGGATCAAGAAAGGTGATCCAAAGGACGTTATATGCCAAGAAGTTAG CCGGGTCCGACCAGATCTTCTTGTTTTGGGAAGCCGTGGTCTAGGCCGCTTCCAAAAGGTCTTTGTGGGGACTGTGAGTGGGTTCT GTGTGAAGCATGCTGAGTGTCCAGTCCTCACGATCAAACGCAATGCCGATGAAACTCCCAGTGATCCTGCTGATGACTAAACCAAC TACATCATAAACTCTTCTTTCATCTTATCCCAGAGTGTGCTTTTGTGTGTCCAACTCTATGATTAATAATAATTGTATGTGTGTGT ATGTGCCTGTGCAGTCTGCTATGTTTTGTGGTTTATATCATCCAACATAATATTTCAAATAATTTCATATGATCAGTCTGTTTCTG TTGTC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
ABV89649 universal stress protein family protein [Brassica rapa]	863	1e-090
AAF01537 unknown protein [Arabidopsis thaliana]	832	5e-087
NP_566140 Universal stress protein A-like protein [Arabidopsis thaliana]	812	1e-084
XP_002884276 universal stress protein family protein [Arabidopsis lyrata subsp. lyrata]	809	2e-084
2GM3 Chain A, Crystal Structure Of An Universal Stress Protein Family Protein From Arabidopsis Thaliana At3g01520 With Amp Bound	795	1e-082

Swiss-Prot top hits (Blast detail)	Score	e value
Q8LGG8 Universal stress protein A-like protein	812	5e-086

TrEMBL top hits (Blast detail)	Score	e value
A8IXS8 Universal stress protein family protein	863	9e-091
Q9LYJ2 At5g14680	761	6e-079
B9IJM2 Predicted protein	708	9e-073
D5LN28 USP transcription factor	708	9e-073
B6TGD5 Ethylene response protein	688	2e-070

Arabidopsis top hits (Blast detail)	Score	e value
AT3G01520.1 universal stress protein (USP) family protein	813	4e-087
AT5G14680.1 universal stress protein (USP) family protein	762	3e-081
AT1G68300.1 universal stress protein (USP) family protein	213	1e-017
AT3G58450.2 universal stress protein (USP) family protein	205	1e-016
AT3G58450.1 universal stress protein (USP) family protein	203	2e-016

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


8	2			33%


6	4			67%

Unigene Members	Member information