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Information for unigene UN46585

FASTA Sequence
Unigene ID: UN46585Length: 770 SSR 
GGACAAACACGCAGTATTCCCTTTTACTCCTCCCCTAATTTCAAACCCTAGCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCATCAA
GAAATCGAGAGACCATGAAAGGAGGCAATTCAAAGGCCGACTCCAGAAACTCAAAGCTGTCTGTGAACAAGAAGCCTACGAAGGCG
AGCAAAGCAGCTGCTGCTGGTAAAGATCCTAACAAACCTAAGAGGCCTGCCAGTGCTTTCTTCGTTTTCATGGAGGACTTCCGTCA
GACTTACAAGAAGGAGAATCCCAACAACAAATCTGTTGCTGCTGTTGGAAAAGCTGGTGGAGAGAAGTGGAAATCCTTGTCTGACT
CTGAGAAGGCTCCCTACGTAGCTAAGGCTGATAAGCGCAAGGTTGAGTATGAGAAGACCATGAAGGCCTACAACAAGAATCTGGAG
GAAGGTCCAAAGGAGGACGAGGAATCTGATGATAAGTCAGTCTCTGACGTTAGTGAAGAGGAGGATGCGGATGATAAGAGTGATGA
GGAGGAAGACGATTGACTAACAAGTTGAAGTTGGCAGCATTATATAAAGGATCTCTCTCTCATGTTTTTCTTTCTCTTAAAATGTT
AACGAGGCTGGTTTTATTTTTTCTCATGTTTCTTCTGTTTAGTACTATCACTATCTCCCACTGATTCTGATTCTGATTCTACGGGT
AATGGAAAAATTGTGCTATCTTCATGTTTGCAGCTAAAGTTTTTATGGCTCTACGTTTGTTATGGTCATAGATTCTTAATTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF80615 F2D10.18 [Arabidopsis thaliana]5906e-059
BAJ33881 unnamed protein product [Thellungiella halophila]5825e-058
BAJ33706 unnamed protein product [Thellungiella halophila]5809e-058
XP_002890402 hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp. lyrata]5744e-057
NP_564123 high mobility group B2 protein [Arabidopsis thaliana]5727e-057

Swiss-Prot top hits (Blast detail)Scoree value
P26585 HMG1/2-like protein4631e-045
P40619 HMG1/2-like protein4318e-042
P40620 HMG1/2-like protein4093e-039
P27347 DNA-binding protein MNB1B4012e-038
P40621 HMG1/2-like protein3709e-035

TrEMBL top hits (Blast detail)Scoree value
Q9LM85 F2D10.185904e-059
O49596 HMG protein5725e-057
P93047 At1g20690/F2D10_155725e-057
A8MQZ3 Uncharacterized protein At1g20693.35636e-056
Q2V4M2 Putative uncharacterized protein At1g20693.25546e-055

Arabidopsis top hits (Blast detail)Scoree value
AT1G20696.1 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5822e-060
AT1G20693.1 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5723e-059
AT1G20693.3 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5705e-059
AT1G20693.2 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5608e-058
AT1G20696.3 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5501e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information