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Information for unigene UN46599
FASTA Sequence |
Unigene ID: UN46599 | Length: 1176 |
SSR | | GGGGTTCTTACTATATTCAGAGAGGCATGCCTGGCTCTACTCCTCCTCCTCCTCCTCAGACACAACAGCCGTTTCACGGATCACAA
GGGTTTCACCATTTCTCCAACCCCAACTCTCCTTTCGTCTCAAACCCAAACCTGAACCAAGTAGGCGGCGGCTCCACTGCATTCGT
GTCTCCTCCTTTACCAGTTGAGTCTTCTCCTGCTGACTCTTCAGCGGCTGCTCCTCCTCCTCCTCCTCAGTCTGGTGAGAAGAGGA
AGAGAGGACGGCCTAGGAAATACGGACAAGACGGTCCTGTTTCCTTGGCATTGTCTCCCTCAGCCTCCATGTCCCCAAACTCTAAC
AAACGTGGCCGTGGTAGACCTCCTGGCTCAGGCAAGAAGCAAAGAGTTGCTTCCACTGGTGAATTGATGTCTTCATCGTCTGGGAT
GAGCTTCACTCCTCATGTAATTGTAGTTTCCGTTGGTGAAGACATTGCGTCAAAGGTTATGTCTTTTACGCAGCAAGGTCCAAGAG
CGATTTGTGTCTTATCCACTACCGGTGCAGTCTCTACCGCAACTATTCTTCAGCCATCACCTTCTCATGGAGCTATTAAATACGAG
GGTCGTTTCGAGCTCTTATCTCTCTCAATTTCTTACATGGACGCAACTGAAAATGACAACTCAAACCGCAGTGGAAACCTATCCGT
CTCACTCGCTAGCCCTGATGGTCGTGTCATTGGCGGTGGAATTGTTGGGCCTTTGATAGCAGCAAGCCCTGTTCAGGTTATCGTTG
GGAGCTTCCTTTGGGCGGTTCCAAAAGGGAAGCTAAAAAAACGGGATGAAGCTTCTGAAAAAGATGTCCAAGACACTGATGGTTTG
GAGAACAACGACAACACTGCACCAACTTCCCCTCCTCCTCCTGTTCCTCAACAAAGCCAGAACCTTGTTCAGACTCCTGTAGGGAT
GTGGTCAACCGGTTCAAGATCGATGAATATGCATCATGCCCATATGGACATTGATCTAATGCGTGGATGATGGTTCATATGTATAG
TAGATAAGCATTGAAATCTAGGAGATGAAGAAAGCTAACCTCTCTTAAGAAAAAAAAAATGTCTTTTGGTTTATGTTTAGGACAAG
AAAAGACTTGTAGTGATTTTTCAGAACTCCTGTGTGTTTAATTGATTTGGTTTCATAT
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GenBank top hits (Blast detail) | Score | e value |
XP_002878374 hypothetical protein ARALYDRAFT_324562 [Arabidopsis lyrata subsp. lyrata] | 1318 | 5e-143 |
CAB71061 putative DNA-binding protein [Arabidopsis thaliana] | 1266 | 5e-137 |
NP_191690 AT hook motif DNA-binding family protein [Arabidopsis thaliana] | 1266 | 5e-137 |
NP_182109 AT hook motif DNA-binding family protein [Arabidopsis thaliana] | 935 | 1e-098 |
XP_002511843 DNA binding protein, putative [Ricinus communis] | 780 | 1e-080 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9S7C9 Putative DNA-binding protein ESCAROLA | 220 | 4e-017 |
TrEMBL top hits (Blast detail) | Score | e value |
Q8L7L5 AT-hook motif nuclear localized protein 11 | 1266 | 3e-137 |
Q9M2D3 Putative DNA-binding protein | 1266 | 3e-137 |
O80834 AT-hook motif nuclear localized protein 9 | 935 | 8e-099 |
B9RDQ4 DNA binding protein, putative | 780 | 8e-081 |
C6T9A7 Putative uncharacterized protein | 765 | 4e-079 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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