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Information for unigene UN46606
| FASTA Sequence |
| Unigene ID: UN46606 | Length: 983 |
SSR | | GGACTTTGAAAACCTTCTCTCTCTCTCTCTCCGGTTTGACCCGATAAGTTCTCCACCAGAGACGCACCAATCTCTCTCTCTCTTCG
TAGATCTGTTTCGTTTCCTGACGTCATCTGAGATCGGAACCTCTCGTTCTCAGATCTATTCGATCTCTCGTTCCCCTATGCTCTGC
TCCCAGATCCGTCTCGATTACAATGGCGGAGACTCTCAAAAAAGAAGACTCAATCACGATTCGAGAGGTCTGGAACGACAACCTCC
TCGAGGAATTCGCCCTAATCCGTGAGATCGTCGACACGTTCACCTACATCGCCATGGACACGGAGTTCCCGGGAGTCGTCCTCAAG
CCCGTCGAGACCTTCAAGCACAACGGCGGTTACGATTTCGGTTATTTGGTGAAGCTGCTGACGTGTAAAGAGCTGCCGATGACGCA
GGCGGATTTCTTCAAGCTGTTGTATGTGTATTTCCCAACGGTGTACGACATCAAGCACTTGATGACGTTTTGTAATGGGCTGTTTG
GTGGGCTGAACAGGCTTGCGGAGCTTATGGGGGTGGAGAGAGTTGGGGTTTGTCATCAGGCGGGGTCGGATAGCTTGCTTACGTTG
GGGTCGTTTAGGAAGCTCAAGGAGCGTTATTTCACTGGGTCGACTGAGAGATGCACTGGTGTTCTGTATGGTCTAGGTGTGGAAGA
TGGTGGTGGTGGTACTAATGTTGCTAATTAAGAGGGAAATAATGATAATAAGGTTAATTATTATTGAGGGAAAGTGGATTATTATT
AGGTTTTTAGGATTTGTGAGTGTGAAGAAGAGACCAATTAGAACTTTGTCTATGTGTAAATTGGCAAAAATTGGTTTCAGTAAGTG
ACTGTTGTGTCTTTGTTGTTCATCTTTCAGGAAAAAAAACCCCTCTGATCAAGTGAGGGGTTGAGTTTATGAATGTATATCAATTC
AGCTACCCTTTTTATTAATAAATAATCTCCAAATTAT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_196657 putative CCR4-associated factor 1-10 [Arabidopsis thaliana] | 550 | 4e-054 |
| XP_002871445 hypothetical protein ARALYDRAFT_487926 [Arabidopsis lyrata subsp. lyrata] | 550 | 4e-054 |
| AAK92792 putative CCR4-associated factor [Arabidopsis thaliana] | 543 | 3e-053 |
| NP_001185452 putative CCR4-associated factor 1-6 [Arabidopsis thaliana] | 439 | 3e-041 |
| NP_178193 putative CCR4-associated factor 1-6 [Arabidopsis thaliana] | 431 | 2e-040 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LEU4 Probable CCR4-associated factor 1 homolog 10 | 550 | 2e-055 |
| Q9SAI2 Probable CCR4-associated factor 1 homolog 6 | 431 | 1e-041 |
| Q9SKZ2 Probable CCR4-associated factor 1 homolog 7 | 423 | 9e-041 |
| Q9S9P2 Probable CCR4-associated factor 1 homolog 2 | 333 | 3e-030 |
| Q3KQ85 CCR4-NOT transcription complex subunit 7 | 286 | 7e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GMB8 Predicted protein | 430 | 2e-040 |
| C6TNY2 Putative uncharacterized protein | 429 | 3e-040 |
| A9NLF8 Putative uncharacterized protein | 428 | 4e-040 |
| C0PQR4 Putative uncharacterized protein | 428 | 4e-040 |
| B9IL41 Predicted protein | 427 | 5e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10960.1 CCR4-NOT transcription complex protein, putative | 553 | 7e-057 |
| AT1G80780.1 CCR4-NOT transcription complex protein, putative | 431 | 1e-042 |
| AT1G80780.2 CCR4-NOT transcription complex protein, putative | 431 | 1e-042 |
| AT2G32070.1 CCR4-NOT transcription complex protein, putative | 423 | 8e-042 |
| AT1G15920.2 CCR4-NOT transcription complex protein, putative | 333 | 2e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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