Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN46636

FASTA Sequence
Unigene ID: UN46636Length: 692 SSR 
GGACCACCCCTGTATTAAAAAAAAAATCGGAAAGGAAGAAGATAAAAAAAATAAATGGCTGCTTCCTTATCCACCTCCGTTGTAGC
TTCGGCTTCGTCGCGTTTGTGGCACCCTGCTTCCAACGCCGGGAAGATTAGCGTCCCTTCGGCTTCGCTTTCTCTCCGCTCTGGTT
CGAGACGGAGTCAGTTTTCTCTCGGCGGCTTTTCCGCCTCAGCTTCTTCTCAGCTGCTCCATTGCTCCTTCCTCTCTTCATCTCTC
TCCCTATCCTCTACATTTTCTGGTTTGTCCATAGCATTTGATGTCAGCAGTGGAACCAGTGGCTTGAACGGGCAGAAGAAACGTAG
AGGGCTTGTTGTGAGAGCTGGAAAAGCTGCTCTGTGTCAAACAAAGAGAAGCAGGTCAAGAAAATCTCTGGCTAGGACTCATGGTT
TCCGTCTGAGGATGAGAACCACTAGTGGTCGAGCCACCATCAAGCGCAGACGTGCCAAGGGACGTTGGAATCTCTGTCCTAAGTCC
AACCCTAGCAGCGGCAAACGGGCTTGAAGACTGTTTCCTTTCCCTCCTCGTTCTCTCTCTCTCTCTGTATTCTTGGCTTTTTTCCG
CCAGATGATACAATGACACGAACAGATGAGCTATTTTCTGTATTTTATTTAACTCCTTATGTATTCTTGATTCGTTTAAAAAAGAA
AAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174202 50S ribosomal protein L34 [Arabidopsis thaliana]6471e-065
XP_002890790 ribosomal protein L34 family protein [Arabidopsis lyrata subsp. lyrata]6335e-064
XP_002522558 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus communis]4302e-040
XP_002274637 PREDICTED: hypothetical protein [Vitis vinifera]3952e-036
P82244 RecName: Full=50S ribosomal protein L34, chloroplastic; AltName: Full=CL34; Flags: Precursor3907e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q9LP37 50S ribosomal protein L34, chloroplastic6476e-067
P82244 50S ribosomal protein L34, chloroplastic3904e-037
Q7X5L7 50S ribosomal protein L341342e-007
Q7X5K9 50S ribosomal protein L341342e-007
Q7X5L1 50S ribosomal protein L341305e-007

TrEMBL top hits (Blast detail)Scoree value
B9S989 50S ribosomal protein L344301e-040
B9I1N1 50S ribosomal protein L34 (Fragment)3781e-034
C6T1Q9 50S ribosomal protein L343305e-029
C6T2Q1 50S ribosomal protein L343252e-028
A5AGC2 50S ribosomal protein L342964e-025

Arabidopsis top hits (Blast detail)Scoree value
AT1G29070.1 ribosomal protein L34 family protein6484e-068

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information