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Information for unigene UN46672
| FASTA Sequence |
| Unigene ID: UN46672 | Length: 523 |
SSR | | GGAAACCTTCTGAGATTTCGCCGGAGCAAAGTCGAGAGAGAGAGAGAGAGATCCAAGCCGTGCCGGAGGAGGACTGGGAGGCGATC
GAGAAGCGCCTTGGCTGCGGCCAAGTCGAGGAGCTCATCGAAGAGGCGCAGGATGAGCTCACGCTCATCGGGAAGATGATCGAATG
GGACCCTTGGGGTGTTCCAGATGACTACGAGTGTGAAGTAATTGAGAACGATGCACCGATTCCAAAGCACGTTCCGCAGCACCGAC
CTGGTCCTCTCCCTGAGGATTTCTACAGAACCCTTGAAGGTCTGATTTCAGAGTCCAAAACAAAAATCCCAGCTGCTGCTACCTCC
ACTGAACCGCAGTTGAAGGAGTAACTTCCAGTTTTTCACATTGTTTGTTTGTGTGCTTTGTTGCTTTGTTTGGCTACTGTTCAGAG
ACAGCGAGCTTCTGAATAAACTGGTTTATAATAATCTTTGAAAACTAAAACAATGTCACTCGTTTCATAAATGTTTTTTATCTTTC
TTCTCAC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_568778 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 5 [Arabidopsis thaliana] | 487 | 2e-047 |
| XP_002864198 hypothetical protein ARALYDRAFT_495348 [Arabidopsis lyrata subsp. lyrata] | 487 | 2e-047 |
| XP_002276087 PREDICTED: hypothetical protein [Vitis vinifera] | 404 | 8e-038 |
| XP_002513634 NADH dehydrogenase, putative [Ricinus communis] | 398 | 4e-037 |
| XP_002327504 predicted protein [Populus trichocarpa] | 393 | 2e-036 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FLX7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial | 487 | 1e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9RIR5 NADH dehydrogenase, putative | 398 | 3e-037 |
| B9MX65 Predicted protein | 393 | 1e-036 |
| C6T2Y2 Putative uncharacterized protein | 389 | 3e-036 |
| A9P8K8 Predicted protein | 388 | 4e-036 |
| Q8W544 NADH-ubiquinone oxidoreductase (Fragment) | 370 | 5e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G52840.1 NADH-ubiquinone oxidoreductase-related | 492 | 3e-050 |
| AT4G28005.1 LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT5G52840.1); Has 20 Blast hits to 20 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 178 | 8e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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