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Information for unigene UN46755
| FASTA Sequence |
| Unigene ID: UN46755 | Length: 735 |
SSR | | GGAATCTCTTTCTTCTTCTGCTTCTTCATCATCATCATCATCACAGAGGCGTAAATGGCGGCTTCGTTCTCACTCACGAGCTTCAT
CTCCTTCATCTCCCCATTCAAATCCCACACCAAACCAACCCCGCCTCCCAACCTCACTCTCCCCACTCCAACAACAGTCTCCCACA
GACGTAGAAACGATGTCGCCATCGAATCAAAGGCCGTGGACGCGGACGAGCTTCCTCCTTACAACGCTTCTCTCTCCTCCTCTTCA
GCAGCTCGGGGTACAACGTGCAGGTGTTCGTGGAGGACAACGAGTCGGAGGAGAGGCTGGTGAATCGGTTTAGAAGGGAGGTGATG
AGAACCGGAGTCATACAGGAATGCAAGAGGAGGAGGTACTTTGAGAACAAGCAGGATGAGAAGAAGCGGAGGACTCGTGATGCTGC
TAAGCGTAACAAGAAAAGGCGTCCGTTTGCAAAGTTTACTCAAGAGACCAGAGAAGAAGCAGCAGCGGCAGCAACCAAGGGTAAGA
AGAAGGATGAACAAGAAGATAACTGGGACTGGGAGATGCCTGGTGGAGATGTACCTTCTTGAACCACGGTTTCAGTACATAGATCT
CCCCTTCCTTTTCTGTGTATTTTGATTACTCGGTGACTTTGTATGTTCAAATTGCGTGTAACTGGCCCCTCTGGTAATGAGTTCTT
GTCAATGTTAAAAGACATCTTTTTATTATGACTAAAAGTTTAATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875359 hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata] | 502 | 9e-049 |
| NP_566809 ribosomal protein S21 family protein [Arabidopsis thaliana] | 482 | 2e-046 |
| AAK64005 AT3g27160/MYF5_3 [Arabidopsis thaliana] | 478 | 5e-046 |
| CAN82190 hypothetical protein VITISV_031115 [Vitis vinifera] | 353 | 2e-031 |
| XP_002268728 PREDICTED: hypothetical protein [Vitis vinifera] | 353 | 2e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P82024 30S ribosomal protein S21, chloroplastic (Fragment) | 139 | 5e-008 |
| B2UNE2 30S ribosomal protein S21 | 126 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9LI88 Genomic DNA, chromosome 3, P1 clone:MYF5 | 482 | 1e-046 |
| Q94BT7 AT3g27160/MYF5_3 | 478 | 4e-046 |
| A5AI30 Putative uncharacterized protein | 353 | 1e-031 |
| B9RBJ4 Structural constituent of ribosome, putative | 348 | 4e-031 |
| Q8VWX5 Ribosome-like protein (Fragment) | 320 | 8e-028 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G27160.1 GHS1 (GLUCOSE HYPERSENSITIVE 1); structural constituent of ribosome | 498 | 1e-050 |
| AT5G63300.1 structural constituent of ribosome | 243 | 4e-021 |
| AT5G63300.2 structural constituent of ribosome | 201 | 3e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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