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Information for unigene UN46774
| FASTA Sequence |
| Unigene ID: UN46774 | Length: 900 |
SSR | | GATTCCGTTGAAGCTGAAGGAGATAATGATGAAGATGAGGATGGTGATGATGCTTCAGAAGGTGGGGAGGACGCGTCCGGAACTGA
ATCTATTGGTGACGAATGTTCACAAGACGGTAATGGTATGGAGGAAGAAGGTGATCATGATGAGATTGATGGTAAAGCTGAGAGTG
AAGGAGAGGCAGAGGGAATGGATTCTCATCTTATAGAAGAAGAAGAAGAAGACAATCGGTTGCTTCCATTGTCAGAACGTGTTGTG
TTATCCGTTAAGCCTCTTTCAAAGCATGTAGCTGCAGCTGCGTTGCTTGATGAGATACAAAAAGATTCCAGAGTGTTCTACGGCAA
TGACGACTTTTATGTTCTTTTCAGGCTTCATCGAATCCTGTACGAGAGAATTTTGTCTCCAAAAACATATTGCACAGGCGGTGAAG
TGAATCGAAGAAACACGAAAGATACTATTAGTTCACCAGATCCTTATGCAAGGTTTATGAGTGCTCTGTTTAGTCTGCTTAATGGC
TCAGCTGAAAGCTCCAAGTTTGAGGATGAATGTCGAGCTATTATTGGAAACCAATCGTATGTTCTATTCACGTTGGAAAAACTGAT
ATACAAACTAGTTAAACAGCTTCAAGCTGTTGTAGCAGACGATATGGATAATAAGCTTCTTCAGTTGTATGAGTATGAGAAGTCTA
GGAAACCTGGGAGGGTCATTGACTCGGTGTATTATGAAAACGCCAGGATCCTCCTTCACGAGGAAAATATCTATCGGTTGGAATGT
TCGTCCTCTCCACCTCATTTGTCAATCCAGCTTATGGATAATATAATCGAAAAGCCTGAGCTTGTGCAGCTTCCATGGATCCCACG
TTTGCAAATTATCCGCAAAAGAGTTCTTCCACTCATCAGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001190311 paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] | 1213 | 5e-131 |
| XP_002873701 hypothetical protein ARALYDRAFT_488346 [Arabidopsis lyrata subsp. lyrata] | 1166 | 1e-125 |
| NP_197006 paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] | 1160 | 6e-125 |
| XP_002884284 hypothetical protein ARALYDRAFT_477381 [Arabidopsis lyrata subsp. lyrata] | 1066 | 5e-114 |
| NP_186781 paired amphipathic helix protein Sin3-like 1 [Arabidopsis thaliana] | 1017 | 2e-108 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LFQ3 Paired amphipathic helix protein Sin3-like 2 | 1190 | 1e-129 |
| Q9SRH9 Paired amphipathic helix protein Sin3-like 1 | 1017 | 1e-109 |
| O48686 Paired amphipathic helix protein Sin3-like 3 | 692 | 5e-072 |
| O04539 Paired amphipathic helix protein Sin3-like 4 | 647 | 9e-067 |
| Q9XIE1 Paired amphipathic helix protein Sin3-like 5 | 582 | 3e-059 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RUH7 Putative uncharacterized protein | 895 | 2e-094 |
| B9HU88 SIN3 component, histone deacetylase complex | 826 | 2e-086 |
| C5XEY3 Putative uncharacterized protein Sb03g008490 | 818 | 2e-085 |
| B7F7C1 cDNA clone:J033007H10, full insert sequence | 816 | 3e-085 |
| B8ACV2 Putative uncharacterized protein | 816 | 3e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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