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Information for unigene UN46776

FASTA Sequence
Unigene ID: UN46776Length: 955 SSR 
CTAAAAAACCCAATTCGACTCTCTCTCTCTCTCAAATTGGATCCAACGGTCTAATTCTCTCGTAACTCTATGATTTTCTCGGGAAA
CCGAAAGAAAAAACAGAGGTTCACAACGAATCTGACGGAGACGTTTTGAGATTTGTCTTAAAAGGGGGTAATAATAGTGTCTGAAA
ATTTTGTAACTTTTTGCTTGCATCTTCGGTCGGATCCATGACTTACGGCGATGGCGTCGATAAGACGGTGCCTGAGCTGAAATTGA
GAATGGAGGATCCCGAGAACGGAGATTACGTGAAATTAAGAGGAAGATCGGATGAAGAAGAAGAAGAAGAAGAAGGATCATCGGGT
GGGGGGTGTTCGTTAGGGTCGGTGACGTCTGGTTCCATCAGTTTCAAGCAGTCACCTTGATCCGTGTCTCTCCATTCCCTTACATG
GTTTACAACTACTGCGCATTGGCCACTGGAGTTCACTACGGTCCTTACATCTTAGGCTCTCTTATTGGAATGGTCCCTGAGATCTT
TGTCTCCATCTACACGGGAATAATGCTAAGAACACTAGCTGTTGCATCAGAAAAGAGACACGGTCTTTCGGCCATGGAGATAGTAG
TGAATGTTCTTGGTTTCTGTGTAACTGCGAGCGCGACTATAGTCTGCACTATCTATGCGAAGAAGAAGCTAAGCGCAATGCAATCA
GAGGAAGCAGCAGAGACATTATAAAAGTACACACGCTGCTTGAAGAACTCTTTTCATCACCAAACCGCTTAAAGAGCCAGTCACTA
AACGTATCACCACCATCTAACACGATCTTGGAAGTTGTATGTAACTGACCATATTATACGAAAATATTTTGTTTTTGTTTCGTTCA
AATTAATATCTCTGCTTTTTTTGTATAGATATAATTCAACTAGATAATCTAATTATTATTATTTTTCCTTATATAAAATCTAACTC
ATGGTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172707 SNARE associated Golgi protein family [Arabidopsis thaliana]5182e-050
XP_002889935 hypothetical protein ARALYDRAFT_471395 [Arabidopsis lyrata subsp. lyrata]5182e-050
XP_002303542 predicted protein [Populus trichocarpa]4052e-037
XP_002509643 conserved hypothetical protein [Ricinus communis]4009e-037
CBI34802 unnamed protein product [Vitis vinifera]3991e-036

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q6NQK3 At1g124505181e-050
B9GVU8 Predicted protein4052e-037
B9RBV9 Putative uncharacterized protein4006e-037
B9GKS8 Predicted protein3971e-036
Q9SZ65 Putative uncharacterized protein AT4g120003594e-032

Arabidopsis top hits (Blast detail)Scoree value
AT1G12450.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22850.1); Has 1233 Blast hits to 1230 proteins in 347 species: Archae - 2; Bacteria - 557; Metazoa - 104; Fungi - 72; Plants - 132; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink).5188e-053
AT4G12000.1 INVOLVED IN: response to oxidative stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22850.1); Has 1153 Blast hits to 1150 proteins in 277 species: Archae - 2; Bacteria - 485; Metazoa - 104; Fungi - 24; Plants - 140; Viruses - 0; Other Eukaryotes - 398 (source: NCBI BLink).3592e-034
AT4G22850.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12000.1); Has 1331 Blast hits to 1328 proteins in 349 species: Archae - 4; Bacteria - 600; Metazoa - 103; Fungi - 64; Plants - 162; Viruses - 0; Other Eukaryotes - 398 (source: NCBI BLink).3574e-034
AT2G02370.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12450.1); Has 1745 Blast hits to 1745 proteins in 446 species: Archae - 2; Bacteria - 792; Metazoa - 108; Fungi - 97; Plants - 119; Viruses - 0; Other Eukaryotes - 627 (source: NCBI BLink).2713e-024
AT2G02370.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12450.1); Has 1745 Blast hits to 1745 proteins in 446 species: Archae - 2; Bacteria - 792; Metazoa - 108; Fungi - 97; Plants - 119; Viruses - 0; Other Eukaryotes - 627 (source: NCBI BLink).2713e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information