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Information for unigene UN46792

FASTA Sequence
Unigene ID: UN46792Length: 985 SSR 
GGACAACACAACCAACTCTCAACAGAACAACAAGACATGGATTGGTTCTCATGGCTGTCGAGAACAAATCTTGAACCATGTCTCAT
CCACGAATACAGTCTTTCCTTCTCCAAGAACGAGCTCGAACACGAAGACATTGCTTACTTCAACCACGAGTTCCTCCAGAGCATTG
GCGTCTCCATCGCCAAGCACCGTCTCGAGATCCTCAAACTCGCTCGTCGAGAACGCAAGAGATCATCTTCTCTTCTCACCTCTCGT
TCCATCTCCAGAGTCGTGGTTGCCATCAAGAAAACAAGCAGGTGTCTCTCCGATCACGTACGCGCGTGGATCCGCTGCGAGGAAGA
AGAGTCTTCGCGAGCTCTGGTGCTTGTACCGAAGAGAAGTAGTTGCGGCAGCAGCAGTGGTGGGGTTGGTAAGTGGAGAGGAGGGT
TTCTGAAGTCCAGGAACGAGAGATCTGTGACGCCGAGCAACGCAAATGGTGGAGGAGTTCATAAGCAGCAAGAGATGTTGCTGTTG
ACTAATGGGACTCCTTGTAGAATCGATAGCTTCTCGAGTCCTATGGTTTTTGATTACAGTTTCAAGGAGGAGATGGTTTATAAGGA
GAACAGCCAAGATACTTATCTTGAAGAGATCAAATGGGACTCCATGTTTCAGAATCTGAAACCGACTTGAAGTTTTGTTTCTTTTT
TTTTTTTGTTTCTTGATGGTGAGAGATGAGGTTTTAGAGTTCGTTCTTCCACCAGAAGTTTTGCATCTGTTCTTGTGCTTTTCAGT
GTGTGTGTGTGGTTAGCGTTTTTTGTTAGGCTAATTAGTTTTGTTAATTAAAAAAATTAAAAAAATAGGATTTGAGTGCTGAAGTG
TCAGGTCAGGTGAGTGTGGGTAATCATGTTGTGTAATGAGTCTTGTCTCTTCATTCTTTGTTGTTTGCCTCAGTCTTTGTTCCAGT
CAAAACTTTCTCTACAGCTTTTACTTTTACGGTTTTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173028 Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]7351e-075
XP_002890124 hypothetical protein ARALYDRAFT_471774 [Arabidopsis lyrata subsp. lyrata]7135e-073
NP_178167 Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]4367e-041
XP_002889288 hypothetical protein ARALYDRAFT_895940 [Arabidopsis lyrata subsp. lyrata]4286e-040
AAN62342 Jp18 [Citrus trifoliata]3758e-034

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LMQ8 At1g157607351e-075
Q9M8M0 Putative uncharacterized protein T21F11.154365e-041
Q8H6R4 Jp183755e-034
C6T1F5 Putative uncharacterized protein3702e-033
B9MWL7 Predicted protein3684e-033

Arabidopsis top hits (Blast detail)Scoree value
AT1G15760.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80520.1); Has 30 Blast hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).8002e-085
AT1G80520.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15760.1); Has 30 Blast hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4471e-044
AT2G12462.1 unknown protein2392e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information