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Information for unigene UN46843
| FASTA Sequence |
| Unigene ID: UN46843 | Length: 1106 |
SSR | | GGATCTGAAAACATTTGCTATTAAGAAAAAACAACAACAACAACAGAGCACTAAAAATGGCAGCTCTTGCGACCAAACAGTCTCCC
TTGTTGATGTTGTCGTCTCTTCTACTCTTGATCGGTGTATCCACCGGAAGTTTCTATGACAACTTCGATATCACATGGGGAAATGG
TCGTGCCAACATATTTGAGTCTGGACAGCTCTTGACTTGCACCCTCGACAAGATCTCCGGTTCAGGCTTTCAATCCAGGAAAGAGT
ATCTATTCGGAAAGATTGATATGAAGATGAAACTTGTCGCCGGAAACTCAGCAGGAACAGTCACTGCTTACTACCTTTCCTCTAAA
GGCGAGACATGGGATGAGATAGATTTCGAGTTCTTGGGTAATGTTACAGGACAGCCTTATGTTCTCCATACAAATGTGTTCACAGG
AGGTAAAGGTAACCGTGAAATGCAGTTCTATCTCTGGTTCGATCCCACCGCTGATTTCCACACTTACACCGTTCTTTGGAACCCTC
TCAACATCATCTTTCTTGTGGATGGAATCCCGATCCGGGTGTTCAAGAACAATGAGGCTCACGGTGTGGCTTACCCGAAGAGCCAG
CCAATGAAGATCTACTCGAGTCTATGGGAAGCTGATGACTGGGCCACGCAGGGCGGTCGAGTCAAGACGGATTGGAATAATGCTCC
ATTCAGCGCTTTCTACAGGAGTTTCAATGATGTGGACTGTTGTAGCCGGACTTCGGTGTGGAACTGGGTTACGTGCAATGCGAATA
GCAACTCGTGGATGTGGACTACACTTAACCCCAATCAGGTTGGACAGATGAAGTGGGTGCAAGATGAATACATGATCTATAACTAT
TGTACTGATTACAAGAGGTTCCCTCAAGGTCTACCCGCGGAATGCAACCTCGGCTGATCGTGTTTCCGAGCTAATTCAAGCATTTG
ATGAAGTTTCTTTCTTTCTTTCTAATTTGATCTCATGATTTGTTGATTTGATTTTGTTATTCTTTTGAGTTTCTATTTGTTTCCCT
TATTGGGTAATTGATTATACTTTTGGTCATCTGTAATAATTTCATTAATATGATTAAACATTTAAACTGTTGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200561 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1445 | 8e-158 |
| XP_002866211 hypothetical protein ARALYDRAFT_495852 [Arabidopsis lyrata subsp. lyrata] | 1431 | 3e-156 |
| NP_200562 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1427 | 1e-155 |
| XP_002869652 hypothetical protein ARALYDRAFT_329091 [Arabidopsis lyrata subsp. lyrata] | 1276 | 3e-138 |
| NP_194312 xyloglucan endotransglucosylase/hydrolase protein 14 [Arabidopsis thaliana] | 1256 | 7e-136 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FKL9 Probable xyloglucan endotransglucosylase/hydrolase protein 12 | 1445 | 3e-159 |
| Q9FKL8 Putative xyloglucan endotransglucosylase/hydrolase protein 13 | 1427 | 4e-157 |
| Q9ZSU4 Xyloglucan endotransglucosylase/hydrolase protein 14 | 1256 | 3e-137 |
| P35694 Brassinosteroid-regulated protein BRU1 | 921 | 2e-098 |
| Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 23 | 919 | 3e-098 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SJR0 Putative uncharacterized protein | 1009 | 2e-107 |
| B9I6N9 Predicted protein | 997 | 5e-106 |
| B9SJQ9 Xyloglucan endotransglucosylase/hydrolase protein 22, putative | 993 | 1e-105 |
| A5ANA9 Putative uncharacterized protein | 976 | 1e-103 |
| C0SSE3 Xyloglucan endotransglucosylase/hydrolase | 975 | 2e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G57530.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 1446 | 2e-160 |
| AT5G57540.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 1428 | 3e-158 |
| AT4G25820.1 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1256 | 3e-138 |
| AT5G57550.1 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 923 | 1e-099 |
| AT4G25810.1 XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 919 | 3e-099 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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