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Information for unigene UN46856
| FASTA Sequence |
| Unigene ID: UN46856 | Length: 790 |
SSR | | GGGACCAACTTGCTAATCAAAAAATACACTAACTAAGTGTACCGTAGAACTCTTTGATACTAGCTTTCCGTTCATGAAGCGACATT
GTGGTCTTCCCATCAATATAAGCCTATCAAAAAAAAAAAAAAAGAATATCACAACATCAAGTCTAGACAAAGAACAGAGGATCAAG
GTCCGTAAACGAATAAGCTCTCAAAGAGTTCTAGAAAAAAGGAAAAAGAAGAAGATGGTAGACCTTATAAATAAAGATCCTAAGCA
ATCCTAAAGCGCCAGCGAAATGACAATCAGTCCACTGAATAAGGAAGAGGAAGAGATGAGCTGCGGGGCTGTAAGACAGTCTCATT
TGCACGAACCCACCATCACACTCCTCTGGATACTCAGATGCCCTTCAGAAAACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GACATCAGAATGTTTGTGATTATTAAAACAAGATTACAATATTATTTATTCACAAGTTTTATCTAGTAAACCAAAAGTCAAACTTG
TGGATAGAACCCCAGGCTATATATTAGATTAAATAATTGACAGGTTAGAGGAAGAGTGGTGGCGTTTGAGACTGGCTAAAGGAATA
AATTGACACTTTTACAAAAGCTGGCGTAAACGCAAAGTCTCAAGATTCATTCTGACATCAGCAAAGCAAGCAAGCAAACCCAATCA
GACAACAGAGATTCGAACAAGTATCTAGACTGAATAACCCATCTGGAATCTTCGATAGAGCTCCAACGAAGGCTGTGTACACAGTT
TGATCTATCGAACCGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_974721 RING/U-box domain-containing protein [Arabidopsis thaliana] | 257 | 3e-020 |
| NP_195772 RING/U-box domain-containing protein [Arabidopsis thaliana] | 257 | 3e-020 |
| XP_002873006 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 253 | 7e-020 |
| BAJ34285 unnamed protein product [Thellungiella halophila] | 252 | 1e-019 |
| CAN81290 hypothetical protein VITISV_005312 [Vitis vinifera] | 228 | 6e-017 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93WE1 Putative uncharacterized protein At5g01520 | 257 | 2e-020 |
| Q9M022 Putative uncharacterized protein At5g01520 | 257 | 2e-020 |
| A5BMW9 Putative uncharacterized protein | 228 | 4e-017 |
| B9RZ73 Protein binding protein, putative | 225 | 9e-017 |
| A2Q4Q8 Zinc finger, RING-type | 221 | 3e-016 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G01520.2 zinc finger (C3HC4-type RING finger) family protein | 257 | 1e-022 |
| AT5G01520.1 zinc finger (C3HC4-type RING finger) family protein | 257 | 1e-022 |
| AT3G47160.1 protein binding / zinc ion binding | 193 | 3e-015 |
| AT5G58787.1 zinc finger (C3HC4-type RING finger) family protein | 187 | 1e-014 |
| AT5G58787.2 zinc finger (C3HC4-type RING finger) family protein | 187 | 1e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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