RadishBase

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Information for unigene UN46920

FASTA Sequence

Unigene ID: UN46920	Length: 830	SSR
GGGATGAAACCTCCACATCTCTCCTCTCGCCATGAATTCATCGCCGTGAAAGCTTGAGCTCTCTCTCTTCGTGACTCTCTCTCTCT GTGTCTCTCTCTCCGCCATCTCTCTCTCTCTGCGTCTCTCTGTCCGCGTCTCTCTCTTCGCATCTCTCTCGCCATGAAATCGCCAT GAAAGCTTGAGATCTCTCTCTCCGCCTCTCTCTCTCTCCGTGTCTCTCTCTCTCTCCGCCTCTCTCTCTCTCTGCCTCTCTCTCTC AGCTTCGAGGGGATGTGCCTTGCAGTGTGCGATTCTCAGACCCACCTTCAAAGTCCGTGAGTTCCAGGTTCATGAGAGTTTCCCTT TCTCCATTTTGCTGGCGTGGAAAGGGGCATCTGTTGATGCTCAAAATGAAGGAGCTGAGAATCAGCAGAGCACCATTGTTTTCCCC AAAGGAAACTCAATTCCTAGTGTCAAGGCTCTAACGTTTTACCGCTCTGGAACATTCTCTGTCGATGTGCAGTACATTGATGTGAC TGACTTGCAAGCACCTCCAAAAATCAGCACATACACGGTTTGATCTTTGCCCAATGTCGTGTGTATCCTTAAGACTGAAGCGTGCC TTTTTTCAGTTGATGGATCTTATTATCAGTCACGAGTTTGTTTGCTGAGTCTAAGATCATTTTGTGTTGAGTCAAGTCTCGTATGT GGGTTTTAGTTTTGAGAAATGGTGAATGATGATGTATGATTCAGCAATTGTTAAACCTATGTTGTGTTTGTGTTGTTGTTGCAGGA AATGTAACGATGTATAAAGCTATATTTTGTGGTTTATGTGTAATTGTGTTTATGAC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
AAG52244 putative heat-shock protein; 41956-44878 [Arabidopsis thaliana]	457	2e-043
AAL38353 putative heat-shock protein [Arabidopsis thaliana]	457	2e-043
NP_850984 Heat shock protein 70 [Arabidopsis thaliana]	457	2e-043
NP_178110 Heat shock protein 70 [Arabidopsis thaliana]	457	2e-043
NP_178111 heat shock protein 91 [Arabidopsis thaliana]	456	2e-043

Swiss-Prot top hits (Blast detail)	Score	e value
Q2TFN9 Heat shock 70 kDa protein 4	188	1e-013
Q0IIM3 Heat shock protein 105 kDa	184	4e-013
Q92598 Heat shock protein 105 kDa	175	4e-012
Q5R606 Heat shock protein 105 kDa	175	4e-012
P48722 Heat shock 70 kDa protein 4L	174	5e-012

TrEMBL top hits (Blast detail)	Score	e value
Q3EC99 Putative uncharacterized protein At1g79920.1	457	1e-043
Q8VZ83 Putative heat-shock protein	457	1e-043
Q9CA95 Putative heat-shock protein; 41956-44878	457	1e-043
Q2V4B7 Putative heat shock protein	456	2e-043
Q9S7C0 At1g79930/F19K16_11	456	2e-043

Arabidopsis top hits (Blast detail)	Score	e value
AT1G79920.1 ATP binding	457	8e-046
AT1G79920.2 ATP binding	457	8e-046
AT1G79930.1 HSP91; ATP binding	456	1e-045
AT1G79930.2 HSP91; ATP binding	456	1e-045
AT1G11660.1 heat shock protein, putative	185	3e-014

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	2			100%

Unigene Members	Member information