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Information for unigene UN46938
| FASTA Sequence |
| Unigene ID: UN46938 | Length: 1316 |
SSR | | TTTTTTCTGCTGCTACATTATACACATCTTCTCTCTCTCTCTCTCTCTCTGGTAGCCATGGCTTCGGCTACTTTCTCTGTGGCCAA
ACCATCTCTTCAGGGTTTCTCTGACTTCTCAGGACTCAGAAACTCCCCTGCTCTTCCCTTGGGCAAGAAAACTTCTTCTGATGAGT
TTGTTTCCTTCGTCAGTTTCCAGACTTCTGCAATGGGAAGCAATGGAGGATACGGGAAAGGAGTGACCGAGGCCAAGCTAAAGGTA
GCCATCAATGGATTCGGTAGGATCGGTAGGAACTTCTTGATGTCATTGCCATTAACGACACTGGCGGTGTCAAACAAGCGACGCAT
CTCCTCAAATACGACTCGACTCTCGGAATCTTCGACGCTGACGTCAAGCCTTCAGGAGACTCTGCTCTCTCTGTTGATGGAAAGAT
CATCAAGATTGTCTCTGACCGCAACCCATCCAACCTCCCCTGGGGGGAACTAGGCATTGACTTGGTCATCGAAGGAACCGGAGTGT
TTGTAGACAGAGAAGGTGCTGGTAAGCACATTCAAGCTGGAGCCAAGAAGGTTCTCATCACTGCACCTGGTAAAGGTGATATTCCA
ACCTATGTGGTTGGTGTCAATGCTGAACTTTACAGCCATGAAGACACAATCATCAGCAATGCTTCTTGTACTACCAACTGTCTCGC
TCCATTCGTCAAGGTTCTTGACCAGAAGTTCGGGATCATAAAGGGTACAATGACAACCACTCACTCATACACTGGCGACCAGAGGC
TGTTGGATGCTAGCCACCGTGATCTAAGGAGAGCAAGAGCAGCGGCTCCCTAACCTGAAAGGAAAACTCAACGGGATCGCGCTGCG
TGTGCCGACTCCCAACGTCTCGGTGGTCGACTTGGTCGTGCAGGTCTCGAAGAAGACTTTCGCTGAGGAAGTCAACGCTGCTTTCA
GGGATGCGGCTGAGAAAGAGCTTAAAGGTATACTCGATGTCTGCGATGAGCCTCTTGTCTCTGTTGACTTCAGGTGCTCTGATGTG
TCGTCCACCATCGATTCTTCTCTGACCATGGTTATGGGAGATGATATGGTTAAAGTGATTGCTTGGTATGATAACGAATGGGGTTA
CTCGCAGAGAGTCGTTGATTTGGCTGACATTGTTGCCAATAACTGGAAGTGAACAAGATTCAACTGTTTGATGTTGTTCTGCTCCA
TTTTTTATTTTACTGTTATTATGGTGATTCGGAATGTATAATTGTAGTTCCTGAGTTTATTATGTATTTGTGCTCTTCAATTTTAA
TAGTAATAAACTTTATATTCGAACAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAG68209 glyceraldehyde-3-phosphate dehydrogenase [Brassica rapa subsp. chinensis] | 902 | 9e-095 |
| BAJ10475 glyceraldehyde-3-phosphate dehydrogenase [Brassica rapa subsp. chinensis] | 902 | 9e-095 |
| NP_172750 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [Arabidopsis thaliana] | 888 | 4e-093 |
| NP_001117276 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [Arabidopsis thaliana] | 888 | 4e-093 |
| XP_002892719 GAPA-2 [Arabidopsis lyrata subsp. lyrata] | 885 | 9e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P09315 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 850 | 4e-090 |
| P25856 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 833 | 4e-088 |
| P09043 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) | 831 | 7e-088 |
| P12858 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 830 | 9e-088 |
| P19866 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 825 | 3e-087 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3H4P2 Uncharacterized protein At1g12900.3 | 888 | 3e-093 |
| Q9LPW0 At1g12900 | 888 | 3e-093 |
| C0Z2Y9 AT1G12900 protein | 881 | 2e-092 |
| Q6LBU9 GADPH (383 AA) (Fragment) | 850 | 7e-089 |
| A2XU83 Putative uncharacterized protein | 849 | 9e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12900.1 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 888 | 1e-095 |
| AT1G12900.3 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 888 | 1e-095 |
| AT3G26650.1 GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase/ protein binding | 833 | 4e-089 |
| AT1G42970.1 GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate dehydrogenase | 684 | 7e-072 |
| AT1G12900.2 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 595 | 1e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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