RadishBase

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Information for unigene UN47007

FASTA Sequence

Unigene ID: UN47007	Length: 719	SSR
GCCTCAACAGCATTGAAGCTGGTTGGCAGGTTAGTCCGGATCTATATGGTGATAACAATACAAGACTCTTCACATACTGGACGAGT GATGCTTACCAAGCTACTGGCTGCTACAATCTCCTTTGTTCCGGTTTTATACAAATCAACAGCCAAATAGCAATGGGAGCTAGTAT CTCTCCTGTATCTGGCTTCCATAACTCGCAATACGATATCAGCATTACCATTTGGAAGGATCCGAAAGAAGGGCACTGGTGGATGC AGTTTGGAGACGGATACGTGTTGGGGTACTGGCCGAGCTTTCTGTTCTCGTACTTAGCAGACAGTGCGTCGATAGTGGAATGGGGT GGGGAAGTAGTGAACATGGAGGAAGACGGTCACCACACCACCACTCAAATGGGAAGCGGTCTGTTTCCTGATGCAGGGTTCTCGAG AGCAAGTTACTTTCGGAATGTTCAAGTTGTTGATCGGTCTAATAACCTGAAAGAACCAAAAGGGCTCAACACTTTCACCGAGAAGT CTAATTGCTATGATGTTGAGGTTGGTAAGAATGATGACTGGGGGCATTATTTTTACTACGGTGGCCCTGGAAGGAACCCTAGTTGT CAGTAGATGGTGAACAGAAGAAAGAAAATGATGATGATGATGATGAAGATGCAGAGTGACACTTGTGCTGGATGTTTCCTTATGTT TATGTGAAGTGTGGAAATATCGTTTTTGTTG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_200464 uncharacterized protein [Arabidopsis thaliana]	1094	2e-117
XP_002864462 hypothetical protein ARALYDRAFT_495743 [Arabidopsis lyrata subsp. lyrata]	1094	2e-117
NP_566457 uncharacterized protein [Arabidopsis thaliana]	992	1e-105
AAM65243 putative carboxyl-terminal peptidase [Arabidopsis thaliana]	992	1e-105
XP_002882828 hypothetical protein ARALYDRAFT_897583 [Arabidopsis lyrata subsp. lyrata]	992	1e-105

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q9LVC1 Putative uncharacterized protein At5g56530	1094	1e-117
Q8LAN5 Putative carboxyl-terminal peptidase	992	9e-106
Q9LJE0 AT3g13510/MRP15_15	992	9e-106
Q9C8A7 At1g55360	987	3e-105
Q8GUK9 Putative uncharacterized protein At1g55360	981	2e-104

Arabidopsis top hits (Blast detail)	Score	e value
AT5G56530.1 unknown protein	1095	6e-120
AT3G13510.1 unknown protein	992	6e-108
AT1G55360.1 unknown protein	987	2e-107
AT2G44210.1 unknown protein	846	5e-091
AT2G44210.2 unknown protein	846	5e-091

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	2			100%

Unigene Members	Member information