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Information for unigene UN47009

FASTA Sequence
Unigene ID: UN47009Length: 844 SSR 
GGAGATCTCTCTCGATATCATAATTTTCCCTCTCTTTTTCATTTTTTCCACTCTCCCTTATAAATCCCTACCCTCCACTCCAAATC
ATCCATCACGTTTGCAAAATCCTTTCTACACTCATATTCTCTATCTATCTCTTGAGATCCTTCGTTTCAAGATCTTGTTAATATGG
CGGAGGTTATGCGTTCTGAGACGTTAAACATATCCAACAACACTTCTTCCTTAGCGTCTCCGGAGCTTCTTCATGTTCTCGCCGTT
GATGATAGCATCGTCGATCGGAAGTTCATCGAACGGCTACTCAGAGTCTCTTCATGTAAAGTGACTGTTGTCGATAGTGCGACAAG
GGCTTTGCAATACCTTGGATTAGATGGAGACAATAACTCTGGTGGAGTTGAGGATCTGAAGATTAATCTGATAATGACGGATTACT
CTATGCCTGGGATGACTGGATATGAACTACTCAAGAAGATCAAAGAATCATCAGCTTTCAGAGAAATTCCAGTTGTGATTATGTCG
TCAGAGAACATCTTGCCTCGTATTGATAGATGTCTTGAAGAAGGTGCTGAAGATTTCTTATTGAAGCCTGTGAAATTGGCTGATGT
GAAAAGATTAAGAGATTCTTTACTGAAAGCTGAGGAAAGAGTTTTCAAGAACATTATGCACAAAAGAGAGCTAGAAGCCAATGATA
TCTACTCACAGCTAAAACGCGCCAAGATTTGAGTTTCTCTTTTCATATTCCTTGATATGATTGGTTACAGCTCATGTATAAAAGGC
TCGAAAGATTCACACACACACACACACTTAAGTATGTTCTGATTCTTTCAGCTTACGCTTTTGGAACTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877596 hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp. lyrata]8424e-088
NP_190393 two-component response regulator ARR5 [Arabidopsis thaliana]8372e-087
BAA34727 response regulator 5 [Arabidopsis thaliana]8326e-087
AAC26635 two-component response regulator homolog [Arabidopsis thaliana]8301e-086
NP_201097 two-component response regulator ARR6 [Arabidopsis thaliana]7001e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q9SB04 Two-component response regulator ARR58377e-089
Q9ZWS6 Two-component response regulator ARR67006e-073
Q7G8V2 Two-component response regulator ARR155681e-057
Q9ZWS7 Two-component response regulator ARR75447e-055
O82798 Two-component response regulator ARR44972e-049

TrEMBL top hits (Blast detail)Scoree value
Q0WW39 Response reactor 28371e-087
Q0WSS6 Response regulator 67009e-072
B9IEK8 Type-a response regulator5592e-055
B9IEK9 Type-a arp3-like response regulator (Fragment)5592e-055
B9R8Z6 Two-component sensor protein histidine protein kinase, putative5556e-055

Arabidopsis top hits (Blast detail)Scoree value
AT3G48100.1 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator8385e-090
AT5G62920.1 ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator7014e-074
AT1G74890.1 ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator5681e-058
AT1G19050.1 ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator5446e-056
AT1G10470.1 ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator4972e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

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