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Information for unigene UN47016

FASTA Sequence
Unigene ID: UN47016Length: 1039 SSR 
GGCTTCCTCAATCATCTTTTAGGGTTTGAAACGAAATCTCTGAAAACAATGTACGATTGTATGGTGGATGAGGCCAAGCTATGGCT
GGACGAACCTCCGCATCGTAAGAGGAAGCTCGAAGCTCCACCACCACCACCACCGATCGTTGACTTTTTCCCTGTCTATGGAAGCT
TATACCAATCTGGATCCACTCCTTCCACTGTACTGTTGAGCAAGGTGGGACTCCATACCTACAACTTTGACAAGGGGACGAATCTA
CAGTTCAGGAGTGTTCAGAAAGCAAACGAGGAGTATGCTTCGTTTACTACGTACTATATAACGGTTGAAGCGATGGATCCGTTGAA
TGATGATTCAACTGTTACTTTCCAAACCTCTGTTTGGGATGCTGCTACAAAGAGCAACGAGAGCTCCAGATTTATCACAAGAGTGT
GCAGAATCAAAGGAACCAAAGAAGAAACTTCTCTGTGGGACCACGATGCTGTAGATGAGTTCTATAAAGATGATATCGCTTGGCTA
GAGGATGATGCTCTTACAGGAAGTGATAAGCTACAATACTATGAGGTGAAGGAATCGGATATGCGAGATAACTACGAATGGCTTCA
TCTATATGCTGAAGTTGTAATGTTCTCCAAGTGGGCAACTGACCTTAGCGCTTATTTGCCGGTGAAGATGAAGAAAGTAGTGGTAC
GAACGAGGGAAGATGTAGAGACGAGTATGAAGCTCAGGTCAAAGAATGCAACTTTCTACATGAGTTTCACGGCCTGTGGAGGTCTC
GAGTGCAGGGGCGTAATAAGGCGGACGACGGATGGAAGACCACAACACATGAGCCTTCAAGCTATGTGTTGGATCGACAACTAACT
GTCCCTTTTATGTATTTAATTGATCTTTGCAATTGTTAAAATAATCGTACTGGTGACGTAGAGTGCGTCATATTACGTTTGGTAAA
CATACTAACAAAACTTACATTTCAAACTCAACTAAACTTGTGTAATTGAACTAGTCGTCATTCCCTGGTTAACTAATCGGTTCGGT
TTATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879861 hypothetical protein ARALYDRAFT_345820 [Arabidopsis lyrata subsp. lyrata]6015e-060
XP_002879859 hypothetical protein ARALYDRAFT_903307 [Arabidopsis lyrata subsp. lyrata]5918e-059
NP_179653 uncharacterized protein [Arabidopsis thaliana]5291e-051
XP_002867891 hypothetical protein ARALYDRAFT_492861 [Arabidopsis lyrata subsp. lyrata]5102e-049
NP_001119019 uncharacterized protein [Arabidopsis thaliana]4627e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q9SIU9 UPF0725 protein At2g206205295e-053
Q8LFV1 UPF0725 protein At4g295504372e-042
Q5BPP4 UPF0725 protein At3g447703361e-030
Q9FN07 UPF0725 protein At5g638202071e-015
Q8S8D8 UPF0725 protein At2g206251802e-012

TrEMBL top hits (Blast detail)Scoree value
B3H4Z7 Uncharacterized protein At4g20095.34625e-044
B3H6B6 Uncharacterized protein At4g20095.24123e-038
Q3E9Y4 Putative uncharacterized protein2313e-017

Arabidopsis top hits (Blast detail)Scoree value
AT2G20620.1 unknown protein5295e-054
AT4G20095.3 unknown protein4623e-046
AT4G29550.1 unknown protein4372e-043
AT4G20095.2 unknown protein4122e-040
AT3G44770.2 unknown protein3361e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
61  50%

Unigene MembersMember information