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Information for unigene UN47024
| FASTA Sequence |
| Unigene ID: UN47024 | Length: 770 |
SSR | | CAAACAGCCAACCAAAACCAAACATATCTCTCTCTCTCTCTCTCTCTCTCTCGCTGCTTTCAATGGCTTCCTTGCTCGATTCCGTC
ACCGTTACTCGCGTATTTTCTCTTCCGATCACTTCGTCTGCTTCAAAGGTTCCGTCAGTTTCCGCACGGCGGATTCCGGAATTCAG
AGGTTTGAAAGCTTCGCGACGGAGTTCGGTGACTCGGTCGGCTGGTCTTGGTACGAATCTCGGATCCCGATTTGCTCGTGGTGGTC
GAATCGTCTGCGAGGCTCAGGACGCCACTGCCGCCGCCGTGGAAGTACCAAACATCTCTGATTCAGAATGGCAAACACAGGTTCTC
GAGTCAGACGTACCGGTATTGGTCGAGTTTTGGGCACCATGGTGTGGACCTTGCCGTATGATTCACCCCATTGTTGACCAACTGGC
CAAGGATTTCGCAGGCAAGTTCAAATTCTACAAAATCAACACCGACGAGAGCCCAAACACAGCCAACCGTTACGGTATACGCAGCG
TTCCCACGGTGATCATATTCAAAGACGGTGAGAAGAAAGACAGTATCATCGGAGCTGTCTCTAAAGAGACGTCGGAGAAAACTATA
GAAAGATTCGTGGTCGAGTAACTAAACAAAAAAAAACAACAAATTTCACTCATGTCTTCTGTGTTGTATAATTCTTCGTAAGGTTT
CTTTTGACTATTTATGTTTCCATTCGCCTACTTGTCTTGTTTAGTATTATGAAAAAAGGGAATAACGAACAATAATTACTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188155 thioredoxin M4 [Arabidopsis thaliana] | 780 | 6e-081 |
| AAF15951 thioredoxin m4 [Arabidopsis thaliana] | 775 | 2e-080 |
| XP_002882937 hypothetical protein ARALYDRAFT_897824 [Arabidopsis lyrata subsp. lyrata] | 770 | 8e-080 |
| BAE99119 thioredoxin m4 [Arabidopsis thaliana] | 722 | 3e-074 |
| ABK96292 unknown [Populus trichocarpa x Populus deltoides] | 496 | 5e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SEU6 Thioredoxin M4, chloroplastic | 780 | 3e-082 |
| O48737 Thioredoxin M1, chloroplastic | 411 | 2e-039 |
| P07591 Thioredoxin M-type, chloroplastic | 405 | 8e-039 |
| Q9XGS0 Thioredoxin M-type, chloroplastic | 404 | 1e-038 |
| Q9SEU8 Thioredoxin M2, chloroplastic | 399 | 4e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PIT9 Putative uncharacterized protein | 496 | 3e-048 |
| Q95AH9 Putative thioredoxin m2 | 490 | 2e-047 |
| A7LNX7 Thioredoxin | 480 | 2e-046 |
| B9HZV8 Thioredoxin m | 479 | 3e-046 |
| B9S2L1 Thioredoxin m(Mitochondrial)-type, putative | 476 | 7e-046 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G15360.1 TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4); enzyme activator | 781 | 2e-083 |
| AT1G03680.1 ATHM1; enzyme activator | 411 | 1e-040 |
| AT4G03520.1 ATHM2; enzyme activator | 399 | 4e-039 |
| AT2G15570.2 thioredoxin M-type 3, chloroplast (TRX-M3) | 280 | 2e-025 |
| AT2G15570.1 thioredoxin M-type 3, chloroplast (TRX-M3) | 276 | 7e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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