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Information for unigene UN47033

FASTA Sequence
Unigene ID: UN47033Length: 753 SSR 
TTTTTCAAAAAGGTTTAATATGACTTTCCAAGAAGATAGGGATGAGTCAGATGAGACAGAGGTGGAAGTGATGAGAACAGCAGACC
ATCTTTCTATGATATAACTAAAGATGCCAATGCTCTCGATAGAGAACTAGAAGCTAGTGGTTTCACCAAAAAGGAGCAGAATGACC
CCGATAAATTTATTGAAAGTGGGTTGGAGAAGAGTAAAGATTCTGACGAGGATGAGGAGTCTGATGATGAAGAGGAGACCTCCGAG
TCCAATGAAGAAGAAAACCTAAATGAAATGAAATCATTGAAGTTGCAAGACGAGGAGCAGAAAAGTGCAGATGGAGTTGATGCAGA
AGTTGAATTGGATGATAATGAAAAAGGCAAAAGCAGTGGAGATGAAGATGAAGATGAAGATGAAGATGAAGCTGGAAGAGATGAGG
AGCTGGACAAAAAACTGGGAAAGCAAAGACGCAGAGCCATGGCAGCAGCCAGGGGAGGTAGAAAGTCGCAGTCATCGAGAAACACA
TACAAGGACAAAGGAGGCCGTTCCCAAAACTCCAAGATCCACAACAACATGAGCGGCTGGTGATGATAATAAAACTCTTTTTGCAG
CAATTTTGGATACACAACAAAACTAAACTACGCTTAATGGGCCTCATTCAATGTTGTAAACGGGCTTAGTTTCAAACTTTGAAAAT
CTAAGATTATATGGATAATGTTTCAAACTTTCTATATAAAACATTATCATAATGATATTTTGGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB62649 putative protein [Arabidopsis thaliana]6596e-067
NP_190695 RIO kinase 2 [Arabidopsis thaliana]6596e-067
NP_001190051 RIO kinase 2 [Arabidopsis thaliana]6452e-065
XP_002876078 hypothetical protein ARALYDRAFT_323685 [Arabidopsis lyrata subsp. lyrata]6409e-065
ABK95498 unknown [Populus trichocarpa]3381e-029

Swiss-Prot top hits (Blast detail)Scoree value
P13816 Glutamic acid-rich protein1639e-011
Q75JC9 Uncharacterized protein DDB_G02716701566e-010

TrEMBL top hits (Blast detail)Scoree value
Q9SD21 Putative uncharacterized protein F24M12.3106594e-067
A9PGJ5 Putative uncharacterized protein3387e-030
B9N8L8 Predicted protein (Fragment)3314e-029
C4J123 Putative uncharacterized protein1836e-012
A2WXS3 Putative uncharacterized protein1828e-012

Arabidopsis top hits (Blast detail)Scoree value
AT3G51270.1 ATP binding / catalytic/ protein serine/threonine kinase6602e-069
AT4G26630.1 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55660.1); Has 253164 Blast hits to 95130 proteins in 2571 species: Archae - 852; Bacteria - 27744; Metazoa - 108483; Fungi - 29060; Plants - 10256; Viruses - 1718; Other Eukaryotes - 75051 (source: NCBI BLink).1351e-008
AT4G26630.2 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55660.1); Has 253164 Blast hits to 95130 proteins in 2571 species: Archae - 852; Bacteria - 27744; Metazoa - 108483; Fungi - 29060; Plants - 10256; Viruses - 1718; Other Eukaryotes - 75051 (source: NCBI BLink).1351e-008
AT5G61150.2 VIP4 (VERNALIZATION INDEPENDENCE 4); protein binding1262e-007
AT2G27470.1 NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11); transcription factor1234e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

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