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Information for unigene UN47045

FASTA Sequence
Unigene ID: UN47045Length: 782 SSR 
GGAAGAACACGCGTCACTTTCTCCGTTATTTCTTGTGTTTCTCTCTCTCCCTCTTGCTCACAATCATCGCGACAAACTGAGTGAAT
TCAAGCAGATGCTTTGTGAATCGAAATCGAAAGGTGCTGACTTTGTTTCTCTCGGTTCTCTATCTCTCTCTCTCGCTCTCGTGAGA
GAAGATAGTGAAGAAGAAGCCAAAAAAAAGGAAAACGATGCCGATGGAAGGTGTGTTGTACTGTAAGCCTCATTTTGAGCAGCTCT
TCAAGGAGACTGGTAGTTTCAACAAGAACTTTCAATCACCTGCAAAGCCATTAACTGACAAGCCAACCCCTGAGCTGACAAGGACA
CCTAACCGAGTTGCAGGAACGTTCTCTGGAACGCAAGATAAATGCGCCACTTGCAGTAAAACCGTGTACCCTATCGAGAAGGTAAC
CATGAGAGCCAGTGTTACCACAAGTCCTGCTTCAAGTGTTCGCACGGAGGCTGTCTTATCTCTCCTTCCAACTACGCAGCTCTTGA
AGGAATCTTGTACTGCAAACACCGTTTCGCTCAGCTTTTCAAGGAGAAAAGAAGTTACAATCAACGCAGCTCTTGAAGGAATCTTG
TACTGCCGCCGTAGAAGCCGTCCCTGAATCTTAAGTTTGAAAAAGGTGTTACTACCAAAACTGGTTTCAGATTGTTTTTTTTTTCT
TTGTTTATGTGATTGTGTCACTTGTCTCCTAAATTTGTTCTTGTTGTGATTTTGAAAAGTCTTACCAATAATCTATATTTTTAAGA
TTGTCCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879831 LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata]3641e-032
NP_181519 LIM domain-containing protein [Arabidopsis thaliana]3568e-032
NP_001049655 Os03g0266100 [Oryza sativa Japonica Group]3102e-026
XP_002279954 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]2456e-019
AAK49580 transcription factor L2 [Arabidopsis thaliana]2448e-019

Swiss-Prot top hits (Blast detail)Scoree value
P29675 Pollen-specific protein SF31872e-013
Q4U4S6 Xin actin-binding repeat-containing protein 21396e-008
Q9UHB6 LIM domain and actin-binding protein 11217e-006
Q9ERG0 LIM domain and actin-binding protein 11217e-006
Q1LZA7 LIM domain-containing protein 21209e-006

TrEMBL top hits (Blast detail)Scoree value
O04193 At2g39900/T28M21.63566e-032
A2XEV9 Putative uncharacterized protein3101e-026
Q84Q79 Os03g0266100 protein3101e-026
A5BSA7 Putative uncharacterized protein2454e-019
B9DH94 AT3G55770 protein2446e-019

Arabidopsis top hits (Blast detail)Scoree value
AT2G39900.1 LIM domain-containing protein3564e-034
AT3G55770.1 LIM domain-containing protein3376e-032
AT3G55770.2 LIM domain-containing protein3376e-032
AT3G55770.3 LIM domain-containing protein3376e-032
AT3G55770.4 LIM domain-containing protein3376e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information