Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN47052

FASTA Sequence
Unigene ID: UN47052Length: 1152 SSR 
GGGACGACGATATTTATTGGTTTCCTTTATCTTATATATTTTTTTGGTAGGCTAAGTTTTTAAAAGGAAACTAAAGTGTTGCCTCC
ATGTTTTGAAATGACTAATTTAGTTAGTTAAAACAATTCAAATAGTCTACAATCATGTTGCCTGTAAATATGATTAGAAAAGAGGT
TAAAAGTGACAAATTTAAGAGAAACACCGAGAGACTGAACACCATCATTATATATATATACTTTGTCATCACAACATAATGGGCTA
AAATATGATTGCATATCGATAAAATTGTATTTATTAATTACAATGTCGAATCATTTATTAGATTCACAAGTTATATTATACTCCAC
ATTTGTGTTCAAAAAAAATATTATACTCCACATTTTTGTTGGAGAAGGAATACCATGAAACAAGTGGTGCGAGTGTGTAAGACTTT
TGTCATTTTGTTTTGGAACATATACAAAAGACACACAAGTGGTGAGTGAGTGGTAATAATAATAATAATTTGTAAATTGTACATGT
AAATAAAGATAACAGGAGAGACAGTGGGAGAAGTGAAGGCAGTAGCAGACATGCACCAAAGGAAAGCTGAGATGGCTAAGCACTCT
GATGCTTTTATTGCTTTACCTGGTGGATATGGGACACTTGAAGAGCTTCTTGAAGTAATCACTTGGGCACAGCTTGGAATCCATGA
TAAACCAGTAATCAATTTGCATCCATTTCAATTTACATTATATATAAATAATTAAAAATAACTATTTTGAATGTATTATTGTTTAA
TTTATATATGAATGTGAAGGTGGGATTACTGAATGTGGAAGGATACTACGATTCTTTGTTATCATTCATAGACAAAGCAGTGGAAG
AAGGTTTCATTGCACCAACTGCTCGTCATATCATTGTCTCTGCTTCTTCTGCTAAAGACCTTGTCAAGAAACTCGAGGAATATGTA
CCAAGGCATGAGAAGGTAGCCTCAGAGAAAAGCTGGGAGATGGAGCAAATAGGGCAGAGTCCCACTTGTGAAATCTCAAGATGAAA
AGGATAAAGCCCAACTGAATTTTTTTCTAAATTGGGTTCCTTGTTGCTTGTAAAACACAAATTGACTTTATTTGTGTAGTTTATTC
TGTTGTTTAATGTACTTTTAGCATTTTATTTCGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAK32797 T3B23.2/T3B23.2 [Arabidopsis thaliana]3661e-032
NP_565668 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Arabidopsis thaliana]3632e-032
XP_002880937 hypothetical protein ARALYDRAFT_481677 [Arabidopsis lyrata subsp. lyrata]3623e-032
CBI16329 unnamed protein product [Vitis vinifera]3095e-026
XP_002328304 predicted protein [Populus trichocarpa]3095e-026

Swiss-Prot top hits (Blast detail)Scoree value
Q8RUN2 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG13631e-033
Q8L8B8 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG33047e-027
Q9LFH3 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG43002e-026
Q9LYV8 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG62958e-026
Q0JBP5 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL62922e-025

TrEMBL top hits (Blast detail)Scoree value
B9MZ62 Predicted protein3093e-026
B5RHT0 Putative lysine decarboxylase3075e-026
B9IFN6 Predicted protein3067e-026
B9MTC4 Predicted protein3067e-026
C6T8B6 Putative uncharacterized protein3067e-026

Arabidopsis top hits (Blast detail)Scoree value
AT2G28305.1 unknown protein3647e-035
AT2G37210.1 Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.3047e-028
AT3G53450.1 unknown protein3002e-027
AT5G03270.1 unknown protein2868e-026
AT5G06300.1 carboxy-lyase2832e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information